Pairwise Alignments

Query, 261 a.a., ABC transporter for L-Arginine, substrate-binding component (from data) from Pseudomonas simiae WCS417

Subject, 260 a.a., lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT from Rahnella sp. WP5

 Score =  233 bits (594), Expect = 3e-66
 Identities = 118/259 (45%), Positives = 165/259 (63%), Gaps = 2/259 (0%)

Query: 1   MKKLVLLGALALSVLSM-QAFAE-GKPLKIGIEAAYPPFASKAPDGSIVGFDYDIGNALC 58
           MKKL  +  L L + S   AFA   K + IG +  Y PF SK   G +VGFD D+ N +C
Sbjct: 1   MKKLFKVLPLVLVLASAGSAFAAVPKAINIGTDPTYAPFESKDSSGKLVGFDIDLANEMC 60

Query: 59  EEMKVKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTNRYYLTPARLVLKE 118
           +   +KCT+VE +FD LIP+LK +KIDAI+SS+SIT+ R++ +DFT + Y   ARL+  +
Sbjct: 61  KRAAIKCTYVESDFDALIPSLKAKKIDAIISSLSITEKRQQEIDFTEKLYAANARLIAPK 120

Query: 119 GTAVSDSLDELKGKKIGVQRGSIHDRFAKEVLAPKGATIVPYSSQNEIYLDVEAGRLDGT 178
           G+ V  +LD LKGK +GV +GS  + +A  +  PKG  +V Y +Q+ IY D+ +GRLD  
Sbjct: 121 GSKVLPTLDALKGKNVGVLQGSTQEAYANAMWQPKGINVVAYQNQDLIYADLASGRLDAA 180

Query: 179 VADATLLQEGFLDTPAGKGYAFTGPAFTDAKYFGDGIGIAVRKGDKENLDRINAAIAAIR 238
             D     EGFL   AGK YAF GP+  D K+FG G G+ +RK D +  D +N A  ++R
Sbjct: 181 FQDEVAGSEGFLKQAAGKDYAFAGPSVKDDKFFGVGTGMGLRKTDTDLKDALNKAFDSMR 240

Query: 239 ANGKYKEIEKKYFNFDIYG 257
            +G Y ++ KKYF+FD+YG
Sbjct: 241 KDGTYDKLAKKYFDFDVYG 259