Pairwise Alignments

Query, 232 a.a., ABC transporter for L-Arginine, permease component 2 (from data) from Pseudomonas simiae WCS417

Subject, 236 a.a., amino acid ABC transporter permease from Pseudomonas fluorescens FW300-N2E3

 Score =  194 bits (493), Expect = 1e-54
 Identities = 99/216 (45%), Positives = 143/216 (66%), Gaps = 1/216 (0%)

Query: 15  YLGGLLTTLKLLAISLFFGLLAALPLGLMRVSKQPIVNGAAWLYTYVIRGTPMLVQLFLI 74
           ++ GL  TL LL+ S+F G L ++PL + RVS +  V      YTY+ RGTP+ +QL + 
Sbjct: 19  HITGLAMTLWLLSASIFIGFLVSVPLSIARVSNKLYVRWPVQFYTYLFRGTPLYIQLLIC 78

Query: 75  YYGLAQFEAVR-ESFLWPLLSSATFCACLAFAINTSAYTAEIIAGSLKATPNGEIEAAKA 133
           Y G+    AVR +  L      A  C  LAFA+NT AYT EI AG++++  +GE+EAAKA
Sbjct: 79  YTGIYSLAAVRAQPLLDAFFRDAMNCTILAFALNTCAYTTEIFAGAIRSMNHGEVEAAKA 138

Query: 134 MGMSRYKLYRRILLPSALRRALPQYSNEVIMMLQTTSLASIVTLIDITGAARTVNAQFYL 193
            G++ +KLY  +++PSALRR+LP YSNEVI+ML +T++A   T+ DI   AR  N+  +L
Sbjct: 139 YGLTGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATVPDILKVARDANSATFL 198

Query: 194 PFEAYITAGVFYLCLTFILVRLFKLAERRWLSYLAP 229
            F+++    + YL +TF LV LF++AERRWL++L P
Sbjct: 199 TFQSFGITALIYLLVTFALVGLFRIAERRWLAFLGP 234