Pairwise Alignments

Query, 254 a.a., amino acid transporter from Pseudomonas simiae WCS417

Subject, 241 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  240 bits (612), Expect = 2e-68
 Identities = 124/251 (49%), Positives = 175/251 (69%), Gaps = 11/251 (4%)

Query: 4   LEVQDLHKRYGSHEVLKGVSLAAAAGDVISIIGSSGSGKSTFLRCINLLEQPHAGKILLN 63
           +++ +LHK +G ++VLKG+  + A G+V+S+IG SGSGKSTFLRCINLLEQP  G+I++ 
Sbjct: 2   IKISNLHKYFGDNQVLKGIDESIARGEVVSVIGPSGSGKSTFLRCINLLEQPTQGEIVI- 60

Query: 64  NEELKLVANKDGAMKAADPKQLQRMRSRLSMVFQHFNLWSHMTAIENVMEAPVHVLGVSK 123
                     DG    A    + ++R ++ MVFQ+FNL+ H T  +N+  APV +  +++
Sbjct: 61  ----------DGQSITAPDACIDKLRQKVGMVFQNFNLFPHKTVQQNITLAPVKLGLMTQ 110

Query: 124 KEAREKAEHYLAKVGVGHRKDAFPGHMSGGEQQRVAIARALAMEPEVMLFDEPTSALDPE 183
            EA  +A   L +VG+  +  A+P  +SGG++QRVAIARALAM+PE+MLFDEPTSALDPE
Sbjct: 111 AEADSEAMRLLDQVGLSDKASAYPASLSGGQKQRVAIARALAMKPELMLFDEPTSALDPE 170

Query: 184 LVGEVLKVMQDLAQEGRTMVVVTHEMGFAREVSNQLVFLHKGIVEERGNPREVLVNPQSE 243
           +VG+VL VM+ LAQ G TMV+VTHEMGFA++VS++++F+  G V E   P  +   PQ  
Sbjct: 171 MVGDVLDVMKQLAQAGMTMVIVTHEMGFAKDVSDRVIFMDGGYVVESNVPALLFGQPQEP 230

Query: 244 RLQQFLSGSLK 254
           R Q FLS  L+
Sbjct: 231 RTQAFLSKVLR 241