Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  546 bits (1406), Expect = e-159
 Identities = 303/539 (56%), Positives = 390/539 (72%)

Query: 1   MSLRNMNIAPRAFLGFAFIGALMLFLGVFALNQMSKIRGATEDITMSSVPSIRALDEFTQ 60
           MSLR++NIAPRAFLGFA I  L++ LGVFA N+MS IR A+ ++  + VPS+  L    +
Sbjct: 1   MSLRSLNIAPRAFLGFAVIALLVVILGVFAANRMSVIRQASLEMEQTQVPSVGYLANVLE 60

Query: 61  LTLRLRVLSYRLLTNREPEVQQKTLEAFEVRNQQIRTAQGIYEKLIESSEERAAYDDYVR 120
             LR+R+LS+R+L NR+P    +      V  +++  A   Y  L  + +E   Y  +  
Sbjct: 61  NVLRMRILSFRILVNRDPASLTEAESRIGVLVEKLNKANSSYAALPSTPQEAELYKVFSA 120

Query: 121 LLGQYHQIEERMKSLSRANQVEELRSLLNNELLSNSEQVNAVLTRLLDINNKMALATNKD 180
            L +Y Q ++ M  LSR N+ +ELR+ +N  +   ++ +   L +L+ IN   A  ++  
Sbjct: 121 TLEKYLQAQKEMLDLSRQNKADELRTHINTRIKEGTDLMGEQLNKLIAINVAGASESSAK 180

Query: 181 AEDQYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIKVD 240
           A + Y+ A   ++ + + A L T++ A LLTRSI  P+ +ALEAA  +A GNL + I  D
Sbjct: 181 AGEHYDSAITGIIIVSISAALATVVLALLLTRSIVAPLNRALEAARTIASGNLVQVIADD 240

Query: 241 GSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIEQ 300
           G DE GRLL A+A MQ  LR T+++IAGSATQL +AA+EL+AVT ES+RGL QQ+NEIEQ
Sbjct: 241 GKDEPGRLLQALATMQVSLRQTIEQIAGSATQLGAAAQELSAVTQESSRGLQQQHNEIEQ 300

Query: 301 AATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATL 360
           AATAVNEMT+AVEEVARNAVSTSEAS  +T +A +GR  V ETV AI+ M+ DVQATA++
Sbjct: 301 AATAVNEMTAAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMTHDVQATASM 360

Query: 361 IGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420
           I  LA + RDIGKVLDVIR +A+QTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT
Sbjct: 361 IEGLAVQGRDIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRT 420

Query: 421 QQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERN 480
            QST EIE+M+  IQ GT  AV SM+ S +R +STL +A+ AG++L+ I  +I +INERN
Sbjct: 421 AQSTQEIEKMVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQSIHQINERN 480

Query: 481 LVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRF 539
           LVIASA+EEQAQV+REVDRNLVNIRDL+ QSA+GA QTS A+ ELSRLAV LN MV RF
Sbjct: 481 LVIASASEEQAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVGLNAMVARF 539