Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 639 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  289 bits (740), Expect = 2e-82
 Identities = 163/363 (44%), Positives = 233/363 (64%), Gaps = 2/363 (0%)

Query: 179 KDAEDQYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNLTRPIK 238
           +DAE        +V +LL  A L+ ++ A ++TR IT P+ + L   E +A G+L+  + 
Sbjct: 279 RDAESAQARTLQLVSTLL--ALLVGVIAAVIITRQITGPLRETLTVVERIASGDLSHTVI 336

Query: 239 VDGSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEI 298
           V   DE G L   +A+M   LRD +  I    TQ+ASAAEEL+AVT++++ G+  Q  E 
Sbjct: 337 VTRRDELGVLQQGIARMGVTLRDLISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVET 396

Query: 299 EQAATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATA 358
           +Q ATA++EMT+ V+EVARNA   S+A+  A   A  G  +V E ++ IER++ +V  + 
Sbjct: 397 DQVATAMHEMTATVQEVARNAEEASQAAAAADGEARAGDKVVSEAIAQIERLASEVVRST 456

Query: 359 TLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAH 418
             +  L  ES  IG V+DVI+ +A+QTNLLALNAAIEAARAGEAGRGFAVVADEVR LA 
Sbjct: 457 DAMTVLQQESDKIGSVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQ 516

Query: 419 RTQQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINE 478
           RTQ+ST EIE ++  +Q GT+     M NS    +S++ + + AG SL  I   +  I  
Sbjct: 517 RTQKSTEEIEGLVAGLQNGTQQVAAVMNNSRSLTDSSVALTRKAGESLGNITRTVSNIQS 576

Query: 479 RNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGR 538
            N  IA+AAE+Q+ VA E+ R+++N+RD+S Q+A  + +T+A+S EL+RL   L  MV  
Sbjct: 577 MNQQIAAAAEQQSAVAEEISRSIINVRDVSEQTAAASEETAASSVELARLGNQLQMMVSH 636

Query: 539 FRL 541
           FR+
Sbjct: 637 FRV 639