Pairwise Alignments

Query, 872 a.a., alanyl-tRNA synthetase from Pseudomonas simiae WCS417

Subject, 860 a.a., alanine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

 Score = 1097 bits (2838), Expect = 0.0
 Identities = 550/862 (63%), Positives = 652/862 (75%), Gaps = 16/862 (1%)

Query: 1   MKSAEIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRA 60
           M + E+R AFL FFE +GH  V SSSL+P NDPTLLFTNAGMNQFKDCFLG EKRAYTRA
Sbjct: 3   MSTDEVRRAFLSFFESKGHQIVESSSLVPANDPTLLFTNAGMNQFKDCFLGLEKRAYTRA 62

Query: 61  VSSQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWTFLTGVLKLP 120
            ++Q+CVRAGGKHNDLENVG+TARHHTFFEMLGNFSFGDYFK+DAI +AW FLT VL+LP
Sbjct: 63  TTAQRCVRAGGKHNDLENVGFTARHHTFFEMLGNFSFGDYFKEDAIQYAWEFLTDVLQLP 122

Query: 121 KEKLWVTVYASDDEAYDIWTKEVGVPAERMVRIGDNKGAP-YASDNFWTMGDTGPCGPCT 179
           KE+L VTVY +DDEA+DIW K+VG+PA+R++RIGD KG   + SDNFW MGDTGPCGPCT
Sbjct: 123 KERLLVTVYETDDEAFDIWNKKVGIPADRIIRIGDKKGGKKFDSDNFWQMGDTGPCGPCT 182

Query: 180 EIFYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLER 239
           EIFYDHG  IWGGPPGSPEEDGDR+IEIWNNVFMQFNR ADG + PLP PSVDTGMG+ER
Sbjct: 183 EIFYDHGDHIWGGPPGSPEEDGDRFIEIWNNVFMQFNRHADGTMEPLPKPSVDTGMGIER 242

Query: 240 ISAVMQHVHSNYEIDLFQSLLAAAAKAIGCTNEDQASLKVVADHIRSCGFLIADGVLPSN 299
           ISA+MQ VHSNYEID+FQ+L+ AAA AIG  +    SL+VVADHIRSC FLI DGV+PSN
Sbjct: 243 ISAIMQGVHSNYEIDVFQTLIKAAADAIGYQDLTNQSLRVVADHIRSCAFLIVDGVMPSN 302

Query: 300 EGRGYVLRRIIRRACRHGNKLGANGSFFYQIVAALVAEMGEAFPELKQNQAHIERVLKAE 359
           EGRGYVLRRIIRRA RHGNKLGA G+FF+++V  L   MG A  ELK+ QA +E+VL+ E
Sbjct: 303 EGRGYVLRRIIRRAVRHGNKLGAQGAFFHKLVGPLAEVMGTAGVELKKQQALVEKVLRIE 362

Query: 360 EEQFAKTLEQGLKILEQDLANLQGSVVPGDVVFKLYDTYGFPMDLTGDIARERNLTLDEE 419
           EE F +TL++G+ IL   L  L G V+ G+ VFKLYDTYGFP DLT D+ARER  ++DE 
Sbjct: 363 EENFGRTLDRGMSILNDALDQLSGQVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEA 422

Query: 420 GFEREMEAQRVRARSASSFGMDYNSLVKVDVATEFTGYKATRGAAKVVALYKEGQSVDVL 479
           GFE+ ME QR RAR A  FG DYNSL+K    TEF GY A+RG + V  ++ EG  V  L
Sbjct: 423 GFEQAMEEQRQRAREAGQFGTDYNSLIKSATNTEFCGYTASRGQSVVREMFVEGAEVSTL 482

Query: 480 NEGDDGVVVLDQTPFYAESGGQIGDCGFLEASSGRFDVRDTTKTGGAFLHHGVLASGSLT 539
           + GD  ++VLD TPFYAESGGQ GD G L+  +G F V DT K G A  HHGV+A G L 
Sbjct: 483 SAGDKAIIVLDNTPFYAESGGQCGDTGVLKTDAGIFHVEDTQKLGNAIAHHGVIAQGVLA 542

Query: 540 VGSPVEAQVDADVRHATSLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEA 599
            G  V+A VD   R A SLNHSATHLLHAALR+VLGEHV QKGSLV ++ LRFDFSH EA
Sbjct: 543 TGDQVDAIVDEKRRAAISLNHSATHLLHAALRKVLGEHVAQKGSLVRAETLRFDFSHLEA 602

Query: 600 IKPEQIKALEDIVNAEIRKNTAVETEETDIETAKAKGAMALFGEKYGDSVRVLSMGGDFS 659
           +   +IK +E +VN E+R+N ++ET   +I+ AKAKGAMALFGEKY D VRVLSM GDFS
Sbjct: 603 MTAAEIKEVERLVNQEVRRNHSIETNIMNIDEAKAKGAMALFGEKYDDQVRVLSM-GDFS 661

Query: 660 VELCGGIHANRTGDIALLKIVSEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVK 719
            ELCGGIHA+ TGDI L KI+SEGG+A+G+RRIEAVTG  AL YL+A + Q         
Sbjct: 662 TELCGGIHASNTGDIGLFKIISEGGIAAGIRRIEAVTGEGALDYLDAQQAQHDA------ 715

Query: 720 GSRDNLIDKLSAVLERNRALEKQLEQLQAKAASAAGDDLSASAVDVKDVKVLAARLDGQD 779
                   K+S +  + + LEK+++QL+ K A+     L      +  V VL A+L+G D
Sbjct: 716 --------KVSEMAAKAKLLEKEIQQLKDKLAAKESAGLINQVKQIAGVNVLVAQLNGAD 767

Query: 780 GKALLALVDQLKNKLGRAVILLGGVHEDKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGGK 839
            KAL  +VD LKN+L   +I+LG V E KV L+AGVT DLT ++KAG+L+   A  VGGK
Sbjct: 768 NKALRGMVDDLKNQLSSGIIMLGNVAEGKVGLIAGVTNDLTNKVKAGELVNMVALQVGGK 827

Query: 840 GGGRPDMAQGGGVDAGALDAAL 861
           GGGRPDMAQ GG DA AL +AL
Sbjct: 828 GGGRPDMAQAGGTDAHALPSAL 849