Pairwise Alignments

Query, 872 a.a., alanyl-tRNA synthetase from Pseudomonas simiae WCS417

Subject, 889 a.a., alanine--tRNA ligase from Rhodopseudomonas palustris CGA009

 Score =  835 bits (2156), Expect = 0.0
 Identities = 450/882 (51%), Positives = 584/882 (66%), Gaps = 32/882 (3%)

Query: 5   EIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRAVSSQ 64
           EIR  FL +F + GH  V+SS L+P NDPTL+FTNAGM QFK+ F G EKR+Y RA +SQ
Sbjct: 6   EIRSTFLNYFAKNGHEIVSSSPLVPRNDPTLMFTNAGMVQFKNVFTGLEKRSYQRATTSQ 65

Query: 65  KCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWTFLTGVLKLPKEKL 124
           KCVRAGGKHNDL+NVGYTARH TFFEMLGNFSFGDYFK+ AI  AW  +T    L K+KL
Sbjct: 66  KCVRAGGKHNDLDNVGYTARHLTFFEMLGNFSFGDYFKERAIELAWNLITRDFGLKKDKL 125

Query: 125 WVTVYASDDEAYDIWTKEVGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCTEIFYD 184
            VTVY +DDEA   W K  G   +R++RI         SDNFW MGDTGPCGPC+EIF D
Sbjct: 126 LVTVYHTDDEAAGYWKKIAGFSDDRIIRIP-------TSDNFWAMGDTGPCGPCSEIFID 178

Query: 185 HGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAVM 244
            G  I+GGPPGSP+EDGDR++E WN VFMQ+++       PLP PS+DTGMGLER+++++
Sbjct: 179 RGEHIFGGPPGSPDEDGDRFLEFWNLVFMQYDQVTKDERVPLPRPSIDTGMGLERMASIL 238

Query: 245 QHVHSNYEIDLFQSLLAAAAKAI--GCTNEDQASLKVVADHIRSCGFLIADGVLPSNEGR 302
           Q V S ++ DLF+SL+ A + A+  G T +D AS +V+ADH+RS  FLIADGVLPSNEGR
Sbjct: 239 QGVDSVFDTDLFRSLIDATSSALGRGPTEQDAASFRVIADHLRSSSFLIADGVLPSNEGR 298

Query: 303 GYVLRRIIRRACRHGNKLGANGSFFYQIVAALVAEMGEAFPELKQNQAHIERVLKAEEEQ 362
           GYVLRRI+RRA RH   LGA+    +++V ALV EMG+A+PEL + +A IE  ++ EE +
Sbjct: 299 GYVLRRIMRRAMRHAQLLGASEPLMWRLVWALVREMGQAYPELVRAEAMIEETMRLEETR 358

Query: 363 FAKTLEQGLKILEQDLANL-QGSVVPGDVVFKLYDTYGFPMDLTGDIARERNLTLDEEGF 421
           F KTL++GL IL++  A L +G +  G+  F LYDTYGFP+DLT D  R R + +D   F
Sbjct: 359 FRKTLDRGLAILDEKSAGLKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGINVDIASF 418

Query: 422 EREMEAQRVRARSA------SSFGMDYNSLVKVDVATEFTGYKATRGAAKVVALYKEGQS 475
              M+ QR +AR++      ++    + SL +   ATEF GY        V AL K+G  
Sbjct: 419 TDAMDRQRAKARASWAGSGEAATEAVWFSLREKLGATEFLGYDTETAEGVVTALVKDGAE 478

Query: 476 VDVLNEGDDGVVVLDQTPFYAESGGQIGDCGFLEASSGRFDVRDT-TKTGGAFLHHGVLA 534
           VD L  G+ G ++++QTPFYAESGGQ+GD G L A   RF V DT  K G  F+H G + 
Sbjct: 479 VDALKAGESGAIIVNQTPFYAESGGQVGDTGVLTADGVRFVVTDTMKKAGDLFVHFGTVE 538

Query: 535 SGSLTVGSPVEAQVDADVRHATSLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDF 594
            GS+ +G  +   VD   R A   NHSATHLLH ALRQVLG+H+ QKGSLV   RLRFDF
Sbjct: 539 QGSIKLGDALALDVDHARRSAIRANHSATHLLHEALRQVLGDHIAQKGSLVAPDRLRFDF 598

Query: 595 SHFEAIKPEQIKALEDIVNAEIRKNTAVETEETDIETAKAKGAMALFGEKYGDSVRVLSM 654
            H + I  ++++ +EDI N  + +N  V T    ++ A+  GA ALFGEKYGD VRV+SM
Sbjct: 599 VHQKPITQDELRKVEDIANDIVLENDEVVTRLMAVDDAREAGARALFGEKYGDEVRVVSM 658

Query: 655 GG----------DFSVELCGGIHANRTGDIALLKIVSEGGVASGVRRIEAVTGAAALAYL 704
           G            +SVELCGG H  RTGDI L+ I  E  VA+GVRRIEA+TG AA    
Sbjct: 659 GKAARDHGSNVFGWSVELCGGTHVKRTGDIGLVSITGESAVAAGVRRIEALTGRAARHNA 718

Query: 705 NAAEEQLKEAASLVKGSRDNLIDKLSAVLERNRALEKQLEQLQAKAA---SAAGDDLSAS 761
           NAA    K AAS ++ + D++  +++A+++  + LE++L + + K A   SAAGD  ++ 
Sbjct: 719 NAAISTAKLAASELRTTLDDMPARITALMDERKKLERELSEARKKLAMGGSAAGDGAASD 778

Query: 762 AVDVKDVKVLAARLDGQDGKALLALVDQLKNKLGRAVILLGGVHED-KVVLVAGVTKDLT 820
             D+  +K++A  ++G + K L  LVDQ K +LG  VI L    ED K  +V GVT DL 
Sbjct: 779 VRDIGGIKLMARAVEGIEIKDLKGLVDQGKKQLGSGVIALVATSEDGKGSIVVGVTPDLV 838

Query: 821 GQLKAGDLMKQAAAAVGGK-GGGRPDMAQGGGVDAGALDAAL 861
            +  A DL+++A+  +GGK GGG+PDMAQ GG D     AAL
Sbjct: 839 SRFSAVDLVRKASEVLGGKGGGGKPDMAQAGGPDGSKAGAAL 880