Pairwise Alignments

Query, 310 a.a., chemotaxis protein CheW from Pseudomonas simiae WCS417

Subject, 300 a.a., Chemotaxis protein CheV (EC 2.7.3.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  188 bits (478), Expect = 1e-52
 Identities = 103/288 (35%), Positives = 164/288 (56%), Gaps = 5/288 (1%)

Query: 20  LELLLFRLDGKQLYGINVFKVREVLQCPKLTIMPKSSPVVCGVANIRGATIPILDLALAT 79
           L LLLF L   +L  IN+ KV E++ CP LT +P+S P V G+A +RG ++ ++DL+ A 
Sbjct: 11  LSLLLFTLRSGKLMAINLLKVSEIIPCPPLTKLPESHPHVKGIATLRGTSLSVIDLSRAI 70

Query: 80  GSAGLQDRESPFVIITEYNTKTQGFLVRSVERIVNMNWEEIHPPPKGTGR-DHYLTAVTR 138
           G   L+D +   +I+T+ +   QG  V++V +IV+    +I PPP G+G    ++T VT 
Sbjct: 71  GERPLEDPDGGCLIVTDVSRSKQGLHVQAVSKIVHCLTTDIKPPPYGSGGVRSFITGVTS 130

Query: 139 VDNQLVEIIDVEKILAEVAPTSETISVGVVDAETAHKAVSLRVLTVDDSSVARKQVTRCL 198
           VD  LV+++D+EK++  +AP     +   +  E A    + R+L VDDS VA +Q    L
Sbjct: 131 VDGTLVQVLDIEKVIHGIAPAQIETAPTELSMEDAEVLGNARILVVDDSQVALQQSVHTL 190

Query: 199 QTVGVEVVALNDGRQALDYLRKLVDDGKKPEEEFLMMISDIEMPEMDGYTLTAEIRNDPR 258
           + +G++       ++A+D L +L    +   +E  +++SDIEM EMDGY LT  +R  P 
Sbjct: 191 RNLGLQCHTARSAKEAIDCLLEL----QGTAQEINLIVSDIEMSEMDGYALTRTLRETPD 246

Query: 259 MQKLHIILHTSLSGVFNQAMVKKVGADDFLAKFRPDDLASRVVDRIKA 306
              L+++LHTSL    N    +  GA+  L KF   +L   ++   KA
Sbjct: 247 FAHLYVLLHTSLDSAMNSEKARLAGANGVLTKFSSPELTKYLITAAKA 294