Pairwise Alignments

Query, 436 a.a., flagellar hook protein FlgE from Pseudomonas simiae WCS417

Subject, 260 a.a., flagellar basal body rod protein FlgG (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 87.0 bits (214), Expect = 6e-22
 Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 12/140 (8%)

Query: 8   SGLYAANKQLDVTGNNIANVATTGFKSSRAEFADIY-----AASKLGTGQN------SIG 56
           +G+ A    +DV  NN+ANV TT FK SRAEF D+       A     G N       +G
Sbjct: 10  TGMVAQQLNIDVISNNLANVNTTSFKKSRAEFEDLMYQNMRIAGAATEGDNRIPTGIQVG 69

Query: 57  NGVNLAAVSQQFTQGDVNGSGGILDMAIQGGGFFVQKGSDGSLEYTRSGAFRADKDGYIT 116
            GV    V + FTQGD + +G  LD+AI+G GFF+ +  +G   YTR+GAF+ ++DG + 
Sbjct: 70  MGVRPTTVHKFFTQGDYSNTGNSLDLAIEGDGFFLVQ-VNGEDAYTRAGAFKLNQDGVVV 128

Query: 117 NNTGTSRLQGYAADADGKII 136
              G +    +   A+ K I
Sbjct: 129 TANGYTLQPEFTVPAETKNI 148



 Score = 65.9 bits (159), Expect = 1e-15
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 10/158 (6%)

Query: 278 DGVWKANGANANPTGIAVNMANITQYNSATYRNPPVTDGYATGQITGLKIDGNGVLFATF 337
           D   +A     N  G+ V     T         P  T    T  IT   +  NG + A  
Sbjct: 111 DAYTRAGAFKLNQDGVVVTANGYTL-------QPEFTVPAETKNIT---VTENGHISALD 160

Query: 338 SNQQSKAIGQISLASFNNEQGLQPAGGTSWRETFASGQPGYDTPQAGTLGSIVANSLENS 397
           SN  + A   I L +F N  GL+  G   +  + ASG+     P    +G+I    LE S
Sbjct: 161 SNGAALAEADIPLYTFINPAGLEARGRNLYVPSEASGEAVEGVPGENQVGTIAQGFLEMS 220

Query: 398 NVNLTNELVDLIKAQSNYQANAKTISTQSTIMQTIIQM 435
           NV + +E+V++I  Q  Y+ N+K I T  T++QT +Q+
Sbjct: 221 NVEVVDEMVNMIVGQRAYEMNSKAIQTSDTMLQTAVQL 258