Pairwise Alignments
Query, 1048 a.a., ribonuclease E from Pseudomonas simiae WCS417
Subject, 1065 a.a., Ribonuclease E (EC 3.1.26.12) from Pseudomonas fluorescens FW300-N2E2
Score = 1637 bits (4240), Expect = 0.0
Identities = 911/1068 (85%), Positives = 923/1068 (86%), Gaps = 76/1068 (7%)
Query: 1 MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60
MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE
Sbjct: 1 MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60
Query: 61 RHGFLPLKEISREYFKKAPEGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR 120
RHGFLPLKEISREYFKKAPEGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR
Sbjct: 61 RHGFLPLKEISREYFKKAPEGRVNIKDVLSEGQEVIVQVEKEERGNKGAALTTFISLAGR 120
Query: 121 YLVLMPNNPRAGGISRRIEGEERNELREALNGLIAPADMGLIVRTAGLGRSSEEMQWDLD 180
YLVLMPNNPRAGGISRRIEGEERNELREALNGL+APADMGLIVRTAGLGRSSEEMQWDLD
Sbjct: 121 YLVLMPNNPRAGGISRRIEGEERNELREALNGLVAPADMGLIVRTAGLGRSSEEMQWDLD 180
Query: 181 YLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEALTFIR 240
YLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEALTFIR
Sbjct: 181 YLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEALTFIR 240
Query: 241 QVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVSIDINS 300
QVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVSIDINS
Sbjct: 241 QVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVSIDINS 300
Query: 301 ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKVREC 360
ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKVREC
Sbjct: 301 ARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEEKVREC 360
Query: 361 LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSLAILRL 420
LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSLAILRL
Sbjct: 361 LEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSLAILRL 420
Query: 421 IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHFEVQ 480
IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHFEVQ
Sbjct: 421 IEEEALKDRTAEVRAQVPIPVAAFLLNEKRNSITKIELRTRARIVILPNDHLETPHFEVQ 480
Query: 481 RLRDDSPEAHSGQSSYEIAAAAAEVEEVQPAAATRTLVRQEAAVKTAPARANAPVPTEVA 540
RLRDDSPEAH+ QSSYEIAAAAAEVEEVQPAAATRTLVRQEAAVKTAPARANAPVPTEV
Sbjct: 481 RLRDDSPEAHTNQSSYEIAAAAAEVEEVQPAAATRTLVRQEAAVKTAPARANAPVPTEVT 540
Query: 541 APVAAPAALPEPSLFKGLVKSLVSLFATKEEPVAPVVVEKPAT-ERPARNEERRNGRQQS 599
APVAAPAA PEPSLFKGLVKSLVSLFATKEEP AP VV KPAT ERPARNEERRNGRQQ+
Sbjct: 541 APVAAPAAAPEPSLFKGLVKSLVSLFATKEEPAAPAVVAKPATTERPARNEERRNGRQQT 600
Query: 600 RNRNGRRDEERKPREERAPREERAPRE---ERAPREPREETPTV---ERAPREERAPRTP 653
RNRNGRRDEERKPREERAPREERAPRE ER PRE REE P V ERAPR R R P
Sbjct: 601 RNRNGRRDEERKPREERAPREERAPREPREERQPREAREEAPAVAREERAPRPPREERQP 660
Query: 654 RAPREDRKPRGEREERVRELREPLDAAPAAAGVAVAAEERPARQPREERAPREERQPRAP 713
RAPREDRKPRGEREERVRELREPLDAAPAAA A EERPARQPREERAPR P
Sbjct: 661 RAPREDRKPRGEREERVRELREPLDAAPAAAATA---EERPARQPREERAPRP------P 711
Query: 714 REERQPRAEQAAAA-SDEEVLTGEEQLQEDGQEGAEGDRPRRRSRGQRRRSNRRERQRDA 772
REERQPRAEQAAAA S+EEVL EEQLQEDGQ+ AEGDRPRRRSRGQRRRSNRRERQRDA
Sbjct: 712 REERQPRAEQAAAAASEEEVLNTEEQLQEDGQDTAEGDRPRRRSRGQRRRSNRRERQRDA 771
Query: 773 NGNVIEGSEETG--ENTEAATSEPTGAELAAGLAVTAAVASSVISAPAEAQAHEQAERAT 830
NGNVIEGSEE+ ENTEA P+ A+LAAGLAVTAAVASS ISAPAEAQAHEQAERAT
Sbjct: 772 NGNVIEGSEESESTENTEA----PSAADLAAGLAVTAAVASSAISAPAEAQAHEQAERAT 827
Query: 831 AAVEDTVTVEAPVAETPAVEAPAVEAPVAETPVVEASAVEAPVVEATTPIEAPAVPEVEV 890
AAVE APVAE PVVEA PVVEATTP+E A PEVEV
Sbjct: 828 AAVES--------------------APVAEAPVVEA-----PVVEATTPVEVTASPEVEV 862
Query: 891 APVQEAQ-PEIEVAA----VEQAPVVEPQPVVEAAVVEAAPEVREVREEQTAFQWTAEPA 945
AP EAQ E EV A V + PVV +P VE E APE REEQTAF WTAEPA
Sbjct: 863 APAHEAQVAETEVVAEPAPVVEQPVVAAEPAVETPAEEKAPE--PAREEQTAFNWTAEPA 920
Query: 946 APVEAPEPAPVVEEAPAPVAEVVVAEPTPVVEPAPVVEPAPVVEAPVVAEVAAPVVEAAP 1005
AP APVVE P P EP VEP VVE APVVEAPVVAE APV AP
Sbjct: 921 AP------APVVEPEPTP-------EPVKAVEPE-VVESAPVVEAPVVAEAPAPVEVPAP 966
Query: 1006 VSALTENGRAPNDPREVRRRR-------KEAEAAAAAAAQEAEHESKP 1046
SALT NGRAPNDPREVRRR+ KEAE AAAAAAQ E P
Sbjct: 967 ASALTANGRAPNDPREVRRRKREAERLQKEAEQAAAAAAQAPAAEPAP 1014