Pairwise Alignments

Query, 1048 a.a., ribonuclease E from Pseudomonas simiae WCS417

Subject, 489 a.a., ribonuclease E/G from Vibrio cholerae E7946 ATCC 55056

 Score =  280 bits (715), Expect = 2e-79
 Identities = 152/426 (35%), Positives = 251/426 (58%), Gaps = 7/426 (1%)

Query: 1   MLINATQPEELRVALVDGQRLYDLDIESGAREQKKANIYKGRITRIEPSLEAAFVDFGSE 60
           +L+N T P E RVA+++G  L ++ IE  A+     NIYKG+++R+ P ++AAFVD G +
Sbjct: 5   LLLNVT-PSETRVAMIEGGILQEIHIEREAKRGIVGNIYKGKVSRVLPGMQAAFVDIGLD 63

Query: 61  RHGFLPLKEI--SREYFKKAPEGRVNIKDV---LSEGQEVIVQVEKEERGNKGAALTTFI 115
           +  FL   +I    E   ++ + +  ++D+   + +GQ+++VQV K+  G KGA LTT I
Sbjct: 64  KAAFLHASDIVPHTECVAESEKQQFQVRDISELVRQGQDIVVQVVKDPLGTKGARLTTDI 123

Query: 116 SLAGRYLVLMPNNPRAGGISRRIEGEERNELREALNGLIAPADMGLIVRTAGLGRSSEEM 175
           +L  RYLV MP     G +S+RIE E   E  + +         G I+RTA  G + +E+
Sbjct: 124 TLPSRYLVFMPGASHVG-VSQRIESEAERERLKKIVSHYCDEHGGFIIRTAAEGANEKEL 182

Query: 176 QWDLDYLLQLWTAIKEASLDRSAPFLIYQESNVIIRAIRDYLRQDIGEVLIDSVEAQDEA 235
             D  +L +LW+ + E         ++Y E  +  R +RD++  ++ ++LIDS +  +  
Sbjct: 183 TQDAAFLKRLWSKVIERRSKYKNRSMLYGELGLAQRILRDFVGTELTKILIDSRQEFENL 242

Query: 236 LTFIRQVMPQYASKIKLYEDSVPLFNRFQIESQIETAFQRVVELPSGGSIVIDPTEALVS 295
             F  + +P+  +K++LY    P+F+ +  E++I+ + +R VEL SGG ++ID TEA+ +
Sbjct: 243 KEFTSEYVPELTAKLELYHGDKPIFDMYDTENEIQRSLERKVELKSGGYLIIDQTEAMTT 302

Query: 296 IDINSARATKGSDIEETALQTNLEAAEEIARQLRLRDIGGLIVIDFIDMTPAKNQRAVEE 355
           IDIN+       ++EET   TN+EA + IARQLRLR++GG+I+IDFIDM   ++++ V  
Sbjct: 303 IDINTGAFVGRRNLEETIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMASDEHRKRVLT 362

Query: 356 KVRECLEADRARVQVGRISRFGLLEMSRQRLRPSLGESSGIVCPRCNGTGIIRDVESLSL 415
            +   L  DR +  +   ++ GL+EM+R+R R S+       CP C G G ++ VE++  
Sbjct: 363 SLETALMKDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCSTCPTCEGRGSVKTVETVCF 422

Query: 416 AILRLI 421
            ILR I
Sbjct: 423 EILREI 428