Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

Subject, 331 a.a., 23S rRNA pseudouridine(955/2504/2580) synthase from Klebsiella michiganensis M5al

 Score =  340 bits (873), Expect = 2e-98
 Identities = 181/320 (56%), Positives = 233/320 (72%), Gaps = 7/320 (2%)

Query: 3   TTAPQTPSVQLLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYK 62
           T   + PSV+++ ++ + AGQRIDNFL  +LKGVPK++IYRILRKGEVRVNK R+KPEYK
Sbjct: 14  TMKTEIPSVKMVAIADDEAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYK 73

Query: 63  LQAGDIVRVPPVRVPERDEPVPLAQGLLQRLEAS---IIFEDNKLIVINKPCGIAVHGGS 119
           L+AGD VR+PPVRV E++E        LQ++ A    I++ED+ ++V+NKP G AVHGGS
Sbjct: 74  LEAGDEVRIPPVRVSEKEEEAVSPH--LQKVAALADVILYEDDHILVLNKPSGTAVHGGS 131

Query: 120 GLNFGVIEAFRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYM 179
           GL+FGVIE  R LRP+A+ LELVHRLDRDTSG+L++AKKRS LR LH  LR  G+ K Y+
Sbjct: 132 GLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLRDKGMQKDYL 191

Query: 180 ALVRGNWASSIKSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKP 239
           ALVRG W S  K V+APL K+ L+SGER+V V++EGK + T FKV  RF   AT+V   P
Sbjct: 192 ALVRGQWQSHTKVVQAPLLKNILQSGERIVRVNQEGKPSETRFKVEERF-THATLVRCSP 250

Query: 240 VTGRTHQIRVHTLHAGHCIAGDTKYGDEDFSKEIRDLGGKRLFLHAYMLTVPLPDGGE-L 298
           VTGRTHQIRVHT +AGH IA D +YGD +F K++   G  RLFLHA  L    P  GE +
Sbjct: 251 VTGRTHQIRVHTQYAGHPIAFDDRYGDREFDKQLAGTGLNRLFLHAAALKFTHPGSGEIM 310

Query: 299 KLQAPVDEMWAKTVERLSVA 318
           +++AP+D    + ++ L  A
Sbjct: 311 RVEAPLDNQLKRCLQVLRSA 330