Pairwise Alignments

Query, 319 a.a., 23S rRNA pseudouridylate synthase from Pseudomonas simiae WCS417

Subject, 306 a.a., Ribosomal large subunit pseudouridine synthase C from Enterobacter sp. TBS_079

 Score =  344 bits (883), Expect = 1e-99
 Identities = 180/307 (58%), Positives = 235/307 (76%), Gaps = 7/307 (2%)

Query: 13  LLEVSPEYAGQRIDNFLLARLKGVPKTLIYRILRKGEVRVNKGRIKPEYKLQAGDIVRVP 72
           ++ ++ + AGQRIDNFL  +LKGVPK++IYRILRKGEVRVNK R+KPEYKL+AGD VR+P
Sbjct: 1   MVAIAEDDAGQRIDNFLRTQLKGVPKSMIYRILRKGEVRVNKKRVKPEYKLEAGDEVRIP 60

Query: 73  PVRVPERDEPVPLAQGLLQRLEAS---IIFEDNKLIVINKPCGIAVHGGSGLNFGVIEAF 129
           PVRV ER+E V   +  LQ++ A    I++ED+ ++V+NKP G AVHGGSGL+FGVIE  
Sbjct: 61  PVRVAEREEEVVSPR--LQKVAALSDVILYEDDHILVLNKPSGTAVHGGSGLSFGVIEGL 118

Query: 130 RQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHTALRGDGVDKRYMALVRGNWASS 189
           R LRP+A+ LELVHRLDRDTSG+L++AKKRS LR LH  LR  G+ K Y+ALVRG+W S 
Sbjct: 119 RALRPEARFLELVHRLDRDTSGVLLVAKKRSALRSLHEQLREKGMQKDYLALVRGHWQSH 178

Query: 190 IKSVRAPLQKSNLRSGERMVEVDEEGKEALTLFKVLRRFGDFATMVEAKPVTGRTHQIRV 249
           +K+V+APL K+ L+SGER+V V++EGK + T FKV  R+  FAT+V   PVTGRTHQIRV
Sbjct: 179 VKAVQAPLLKNILQSGERIVRVNQEGKPSETRFKVEERYA-FATLVRCSPVTGRTHQIRV 237

Query: 250 HTLHAGHCIAGDTKYGDEDFSKEIRDLGGKRLFLHAYMLTVPLPDGGE-LKLQAPVDEMW 308
           HT +AGH IA D +YGD +F K++   G  RLFLHA  LT   P+ GE ++++AP+DE  
Sbjct: 238 HTQYAGHPIAFDDRYGDREFDKQLAGTGLSRLFLHAAALTFTHPNTGETIRIEAPLDEQL 297

Query: 309 AKTVERL 315
            + ++ L
Sbjct: 298 KRCLKVL 304