Pairwise Alignments

Query, 327 a.a., peptidase S49 from Pseudomonas simiae WCS417

Subject, 616 a.a., signal peptide peptidase SppA from Vibrio cholerae E7946 ATCC 55056

 Score = 98.6 bits (244), Expect = 4e-25
 Identities = 87/262 (33%), Positives = 123/262 (46%), Gaps = 28/262 (10%)

Query: 72  ANYTALIEVRGVIAD----KEPASADNIVSSLRAAFEDPKVKGVILRINSPGGSPVQSGY 127
           AN  A++   G I D    +     D +   LR A  D  VK V+LR++SPGGS   S  
Sbjct: 324 ANDIAVVVASGAIMDGSQPRGTVGGDTVAGLLREARNDSNVKAVVLRVDSPGGSAFASEV 383

Query: 128 VYDEIRRLRALHPDIKLYAVISDLGASGAYYIASAADQIYADKASLVGSIGVTAAGYGFV 187
           + +EI  L+A    +     +S L ASG Y+I+ +AD+I A   +L GSIG+ +    F 
Sbjct: 384 IRNEIEALKAAGKPV--VVSMSSLAASGGYWISMSADKIVAQPTTLTGSIGIFSVITTFE 441

Query: 188 GTMEKLGVERRTYTSGEHKAFLDPFQPQKADETQFWQGVLDTT-------HRQFIASVKQ 240
             +  LG+    YT G       PF  Q    T   QG  D         +++FI+ V +
Sbjct: 442 KGLNNLGI----YTDG---VGTTPFSGQGL-TTGLTQGAKDAIQLGIEHGYQRFISLVAE 493

Query: 241 GRGDRLKDKDHPELFSGLVWSGEQALPLGLIDGLG---SASSVARDVIGEKELVDFTVEE 297
            RG  LK  D  EL  G VW+ + A  LGL+D LG    A  +A D+    +   + VEE
Sbjct: 494 KRGLTLKAVD--ELAQGRVWTAQDAQTLGLVDQLGDFDDAVHLAADLAQLDQYNLYWVEE 551

Query: 298 --SPFDRFSKKLGASVAEKLAL 317
             +P  +F + L   V   L L
Sbjct: 552 PLTPAQQFLQDLLGQVRVSLGL 573



 Score = 48.9 bits (115), Expect = 3e-10
 Identities = 43/176 (24%), Positives = 70/176 (39%), Gaps = 28/176 (15%)

Query: 94  NIVSSLRAAFEDPKVKGVILRINS-PGGSPVQSGYVYDEIRRLRALHPDIKLYAVISDLG 152
           +IV +LR A  D  V G++L +   P  +  +  Y+   I   +A    +     + D  
Sbjct: 96  DIVETLRHAKNDNNVTGLVLALGDMPETNLTKLRYIAKAINEFKASGKPV---FAVGDFY 152

Query: 153 ASGAYYIASAADQIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRTYTSGEHKAFLDPF 212
               YY+AS AD+IY      V   G +A    +   +EKL V    +  G +K+ ++PF
Sbjct: 153 NQSQYYLASYADKIYLAPDGAVLLKGYSAYSMYYKTLLEKLDVTTHVFRVGTYKSAIEPF 212

Query: 213 QPQKADE----------TQFWQGVLD--------------TTHRQFIASVKQGRGD 244
                 +          TQ W   +D               +  QF+A +K+  GD
Sbjct: 213 VRDDMSDAARESASRWLTQLWSAYVDDVAANRQIEIKTLTPSMEQFVAQLKEVNGD 268