Pairwise Alignments

Query, 239 a.a., 3-oxoacyl-ACP synthase from Pseudomonas simiae WCS417

Subject, 246 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  131 bits (329), Expect = 1e-35
 Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 18/241 (7%)

Query: 2   ITFNIAQWRAWAPGLDSVDDWRAWC--------QAPVLLPASDACPDVSFLPAMQRRRLS 53
           + F+I  W AW+P     DDW+ WC        +  +    S A P V   PAMQRRR S
Sbjct: 3   LRFSILSWGAWSPKYQQHDDWQTWCKHLAETTKEHDLTDGISPALPQV---PAMQRRRFS 59

Query: 54  RLARMAFSVGWPLAESLQDLPLVFISRHGETPRTLDILSDLANEQPLSPTQFSLSVHNAV 113
           RL +M   V +   ++  +   +F SRHGE  RT+ +L D+  +QPLSP  FS SVHN  
Sbjct: 60  RLTKMMLDVSFQ-CDAPPNCRSIFASRHGELHRTIGLLEDIIAKQPLSPLGFSQSVHNTG 118

Query: 114 IGLWSILRNETSEMTALAAAGDGLEHGMLEAAALLNEGAPAVLLVITEEQPPEAYASWIV 173
            G++ IL + T+  T++AA  + L   M+EA A L++ A  +LLV  ++  P  Y  +  
Sbjct: 119 SGIFGILAHNTAPSTSVAAGTETLSQAMVEAFAQLHQSAEPLLLVFGDDPVPPVYDEFTQ 178

Query: 174 DVPFPYALGLLLTPGDEW-QLELSSASVQLTQTQWPHALN---LLRTLLTEQ--VACQHA 227
           +   P ALGL+L P      ++L+ + +   Q Q   AL+   L+  L T Q    C   
Sbjct: 179 ENELPLALGLILAPASHTAPVKLTLSQLTQAQQQNTPALSYGMLIHALATSQNIAGCLSH 238

Query: 228 W 228
           W
Sbjct: 239 W 239