Pairwise Alignments

Query, 326 a.a., sugar ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

Subject, 309 a.a., Ribose import binding protein RbsB from Enterobacter sp. TBS_079

 Score = 72.4 bits (176), Expect = 1e-17
 Identities = 88/330 (26%), Positives = 145/330 (43%), Gaps = 33/330 (10%)

Query: 4   KTLGTLALAMAFSSVALAEEVKIGFLVKQAEEPWFQTEWAFAEKAGKDQGFTVIKIAVPD 63
           K L   AL    +  A+AE  +I F       P+       A KA K+ G   +K+ V D
Sbjct: 2   KKLILAALITMTAGAAMAENEQIVFSTPNLAMPFEVHMQRTAVKAAKEMG---VKLQVLD 58

Query: 64  GE----KTLSAIDTLAANGAKGFVICPPDVSLGPAIMAKAKLNNLKVLAVDDRFVDAKGK 119
           G+    K ++ ++     GA+GF++ P DV+   + + + +  NL V+ + DR VD++ K
Sbjct: 59  GQGSSPKQVADLENAITRGAQGFIVSPNDVNAVSSAVDEIQDANLPVVTL-DRSVDSQKK 117

Query: 120 PMEDVPYVGLDAYKIGQKQGEAMATEAKHRNWDWKDTYAVINTFDELETGKKRTDGSVEG 179
               VP+ G + YK GQ  G+ + ++  +          ++       +  +RT G  + 
Sbjct: 118 ----VPHFGANNYKGGQAIGDFVKSKFPN-----GADIILLTGQPGSSSNIERTKGIRDS 168

Query: 180 LKAAGLPADHILFSAQKTLDVPGS--MDATNSALVKLPSGAKNLIIGGMNDSTVLGGVRA 237
           LKA G   D     A +T +   S  M    S L  LP   +  +I   ND   LG + A
Sbjct: 169 LKAGG---DKYKIVADQTGNWMRSEGMRIVESVLPSLPK--RPQVILSANDDMALGAIEA 223

Query: 238 TESAGFKAANVIGVGINGTDAI-EELKKSDTGFYGSMLLSPDASGYKTASAMFEWVTQGT 296
            +  G K   ++   + G DA+ E L +   G+    + +    G+   +AM + V    
Sbjct: 224 LQGQGVKPGEIL---VTGFDAVPEALARVRDGWLA--VTADQRPGFAVQTAMSQLVANVR 278

Query: 297 EPAKFTALD-NVTLITRANFK--EELSKIG 323
           E    T  D   TLIT+ N +  E +S+ G
Sbjct: 279 EKKAITGADYPPTLITKENLQQAERISEAG 308