Pairwise Alignments

Query, 271 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 263 a.a., Outer membrane lipoprotein omp16 precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (340), Expect = 9e-37
 Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 22/258 (8%)

Query: 11  AVLLGTAVLGGCASHPDSEQALQQAGNDFQQVKEDANVLRFAPKDVIRAGESLARADRLS 70
           A+L     L  C+  P++   L+QA  ++  ++ D    + A  +   A + LA+AD+  
Sbjct: 10  ALLAACVALAACSHDPNAN--LEQARTNYNGLQADPAATKVAALETKDAADFLAKADKAY 67

Query: 71  SYWGSGADVVHYAYLSQRYSAIAREHTEQALNQERGAKLEL-----ERQRLQLALRENKL 125
                 A V   AYL+ +   +A++         R A+ EL     ER R  L  R  ++
Sbjct: 68  MDKEDEAKVDQLAYLTNQRVEVAKQTIAL-----RNAEAELKNAGDERARALLDARNAQI 122

Query: 126 ISVQQQGKWLEEQIASLATTQTDRGLVMTLGDVLFDTGEAELKNSANRTVLKIVQFLQLN 185
             +Q           SL   QT+RG ++T GDVLF T +++L+ S    V K+ QFLQ N
Sbjct: 123 KQLQD----------SLNAKQTERGTLVTFGDVLFATNKSDLRASGMTNVNKLAQFLQEN 172

Query: 186 PKRVVRIEGYADNTGGERENLKLSRDRAQSVADVLVDLGIDEKRIQVEGYGDQYPVEANA 245
           P R V IEGY D+TG +  N  LS  RA SV   LV++G++  RI  +GYG ++PV  N 
Sbjct: 173 PDRKVIIEGYTDSTGSDSYNQSLSERRANSVRMALVNMGVNMDRIVTQGYGKEFPVADNT 232

Query: 246 SERGRAQNRRVEIVFSDE 263
           S  GRA NRRVE+  S++
Sbjct: 233 SVSGRAMNRRVEVTISND 250