Pairwise Alignments

Query, 314 a.a., multidrug transporter from Pseudomonas simiae WCS417

Subject, 302 a.a., Protein of unknown function DUF6, transmembrane (NCBI) from Rhodospirillum rubrum S1H

 Score = 82.8 bits (203), Expect = 9e-21
 Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 22/300 (7%)

Query: 12  KTQKQWLAGLITSVMFLIVCLSWGTTWLGIKIAVESVPPLTSAGLRFLIAFPLFLCFAMV 71
           ++++  L GL  S++ +++C SWG   + IK+A   + P+  AGLR   A  L   ++  
Sbjct: 2   RSRQTALDGLAMSLL-VVLCASWGVQQVAIKVASAGISPMFQAGLRSAGALGLLWAWSAA 60

Query: 72  RREPILFPRESRWFFVFVTLSYFSVPYYLLNYGEMHVSSGLTALLFSCMPVFILIFSALF 131
           R  PIL  R+       V    F      + +G  + ++  + L     P F+ + + +F
Sbjct: 61  RGVPIL-ARDGSLGLGLVIGLLFGGEILFIYWGLSYTTAARSVLFLYTAPFFVALGAHVF 119

Query: 132 L-RERIYLSQVVGIGIGFGSLYMIIKSQGLHL-DHAEFFGVLAILTAAIMHALCYVITKQ 189
           L  ER+  + ++G+   F  +  ++ + GL L D     G   +L AAI+ A   V+ K 
Sbjct: 120 LPGERLRRTDILGLACAFAGVLAVV-ADGLTLPDRRAMIGDAMVLLAAILWAATTVVIKA 178

Query: 190 KGSA-ISVITYNTLPIGIAGLMLF-------VAGLWFETPTFEAITLRSWGALFYLGLVA 241
              A +S        +G++ ++L         AGL+  TP       R   A+ Y  +  
Sbjct: 179 SPLAGLSANKTLVYQLGVSAVLLLGLSAGLGEAGLFDPTP-------RVLAAMAYQTIGV 231

Query: 242 SVGGFIVYFMLLKRLSPIILSFVFIIFPVFAVIIGAWYEGVSISRDLMLYSAILLAGFAI 301
           +   ++V+F ++ R     LS    + PVF V+ GA   G  +S  L L  A+ L GF I
Sbjct: 232 AFASYLVWFWMITRYPASKLSAFSFLTPVFGVLAGAVMLGERVSSGLAL--AMGLIGFGI 289