Pairwise Alignments

Query, 272 a.a., PEP synthetase regulatory protein from Pseudomonas simiae WCS417

Subject, 270 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  267 bits (682), Expect = 2e-76
 Identities = 139/269 (51%), Positives = 187/269 (69%), Gaps = 2/269 (0%)

Query: 1   MKRSAFFISDGTGITAETLGQSLLAQFENITFAKFTRPYIDSVDKARAMVQQINLAAEKD 60
           M    F+ISDGT ITAE  G ++L+QF  + F   T P+++++ KA  + +QIN      
Sbjct: 1   MAPKVFYISDGTAITAEVFGHAVLSQFP-LEFESLTIPFVETLAKAENVKRQINDCFITT 59

Query: 61  GFRPIIFDTIVNQDIREILATSNGFMIDIFSTFLAPLEQELSEHSSYSVGKSHSIGHNSN 120
           G RP++F +IV  +IR+I+ +S G   D  +TF+APLEQ L   +S  + ++H    N  
Sbjct: 60  GERPLVFHSIVKPEIRDIIYSSEGLDYDFLNTFVAPLEQHLGVSASPVLHRTHGKA-NQG 118

Query: 121 YMERIEAVNFALDNDDGARTHYYDKADLILVGVSRCGKTPTCLYMAMQFGIRAANYPLTE 180
           Y  RI+A+NFA+DNDDG    + D+ADLIL+GVSRCGKTP+ LY++MQFGI+AANYP TE
Sbjct: 119 YEARIDAINFAMDNDDGQTMKHMDQADLILLGVSRCGKTPSSLYLSMQFGIKAANYPFTE 178

Query: 181 DDMEHLTLPAALRAHSHKLFGLTIDPDRLTAIRNERKPNSRYSSYAQCEFEVREVENLFR 240
           DDM++L LP AL+ +  KLFGLTIDP RL  IR  R  NSRYSS  QC  EV+EVE +F+
Sbjct: 179 DDMDNLKLPEALKRNKKKLFGLTIDPVRLHEIRQSRMENSRYSSLKQCRLEVKEVEMMFK 238

Query: 241 RENIAHINSTHFSVEEISAKILVEKGVER 269
           RE I +I++T+ SVEEI+ KIL   G+ER
Sbjct: 239 RERIPYIDTTNHSVEEIATKILDVTGLER 267