Pairwise Alignments

Query, 196 a.a., RNA polymerase sigma factor SigX from Pseudomonas simiae WCS417

Subject, 227 a.a., RNA polymerase sigma factor from Sinorhizobium meliloti 1021

 Score = 60.8 bits (146), Expect = 2e-14
 Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 11/165 (6%)

Query: 36  YEELMRRYQRTLFNVCSRYLGNDRDADDVCQEVMLKVLYGLKNFEGKSKFKTWLYSITYN 95
           +  +M+ + R L+ +    L ND DA+DV QE  ++     ++F G +   TWL  I  N
Sbjct: 22  FRAIMQAHNRKLYRIARSILRNDSDAEDVLQEAYVRAFTRFEDFRGDAAITTWLARIVIN 81

Query: 96  ECITQYRKERRKRRLMDALSLD--------PLEEASEEKAPAPEEKGGLD---RWLVYVN 144
           E + + RK RR+ RL   +           PL     +      ++  LD   R    + 
Sbjct: 82  EALGRLRKGRRQMRLAKYMRQSQEAEIIAFPLNSGISDPEKTMAQRQILDLVERLTDDLP 141

Query: 145 PIDREILVLRFVAELEFQEIADIMHMGLSATKMRYKRALDKLREK 189
              R + VLR +  L+ +E A ++ +     + R  RA   L+E+
Sbjct: 142 DTYRTVFVLRVIEGLDNEEAAALLGLKPETARTRLHRARRILKEQ 186