Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 529 a.a., ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like from Synechococcus elongatus PCC 7942

 Score =  157 bits (398), Expect = 5e-43
 Identities = 101/321 (31%), Positives = 160/321 (49%), Gaps = 26/321 (8%)

Query: 19  GSDAPEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLRDKLVSGELD 78
           GS   EK+ L +GF+ ++    ++++   GF Q YGL + + +  SW  +RD  ++GELD
Sbjct: 161 GSGNLEKTDLKVGFIPITCATPIIMSDPLGFYQKYGLKVQVVKMPSWGAVRDSAIAGELD 220

Query: 79  AAHSLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDRHVHQ 138
           A H L  +  A+ LG+G  AP  + +    N NGQ+I +++              RH+ +
Sbjct: 221 AYHMLAPMPIAMTLGLGS-APFSVKLASIENINGQAITVAK--------------RHLGK 265

Query: 139 SRTKLTF-----AQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGRID 193
            +    F        FP   H + L Y+LA+ G++P  DV    VPPP  +A L AG ID
Sbjct: 266 VKEAKDFKGFVIGVPFPFSMHNLLLRYYLAAGGLNPDTDVQIRPVPPPDSIAQLVAGDID 325

Query: 194 GFCVGEPWCASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAILEA 253
              + +P+   AV ++ GF    T+ IW  HP       + ++ + PNT R L  AI+EA
Sbjct: 326 AMLMPDPFNQRAVYEDAGFIHLLTKEIWNGHPCCAFAAGEPWIQENPNTFRALNKAIIEA 385

Query: 254 SRFIEESSENRRSTAQLLSGREYLDAPLDCIEPRLLGTYDDGLGNHWQDPHALRFFADGE 313
           + +  + +ENR   A+ +S R+YL+ P + +E  L G + +G G     P  + F     
Sbjct: 386 TGYASK-AENRAEIAKAISSRQYLNQPPEVVEAVLTGKFPNGQGQELDVPDRIDFNP--- 441

Query: 314 VNLPYLSDGMWFMTQFRRWGL 334
              P+ S   W  +Q  RW L
Sbjct: 442 --YPWQSFANWIQSQLVRWDL 460