Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

 Score =  189 bits (480), Expect = 2e-52
 Identities = 124/378 (32%), Positives = 191/378 (50%), Gaps = 8/378 (2%)

Query: 22  APEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLRDKLVSGELDAAH 81
           A ++ ++ LGF+  +DCA + +A   G  Q  GL++ L+   +W  L D +  G+L+ A 
Sbjct: 275 ASQQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTWEALEDSIRLGQLEGAL 334

Query: 82  SLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDRHVHQSRT 141
            +     A+ +G+GG  P  +A  + +++NG +I LSR     GV + E L + +  +  
Sbjct: 335 MMAAQPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRYLNAGVRSLEDLCQFLAATPQ 394

Query: 142 KLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGRIDGFCVGEPW 201
           +L  A   P    A+ L YWLAS G++P QDV+ V + P +MV  L+AG IDGF  GE  
Sbjct: 395 RLRLAIPDPIAMPALLLRYWLASAGLNPEQDVELVGMSPYEMVEALKAGDIDGFAAGEMR 454

Query: 202 CASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAILEASRFIEESS 261
            A AV+    + LAT   IW  HPEKVLG  +A++   P TA  L  A+L+A    ++  
Sbjct: 455 IALAVQAGAAYVLATDLDIWAGHPEKVLGLPEAWLQVNPETAIALCSALLKAGELCDDPR 514

Query: 262 ENRRSTAQLLSGREYLDAPLDCIEPRLLGTYDDGLGNHWQDPHALRF--FADGEVNLPYL 319
           +  R   ++L   +YL +    +  R    +D GLG+  +    LRF  F   + N P  
Sbjct: 515 QRDR-IVEVLQQPQYLGSAAGTVLQRY---FDFGLGD--EPTQILRFNQFHVDQANYPNP 568

Query: 320 SDGMWFMTQFRRWGLLREDPDYLGVARQVQQLPLYRQAAAALGIATKHPDMRSSQLIDGK 379
            +G W +TQ  RWGL     +   +  +V +  +Y  A AA+G     P  R  +L D  
Sbjct: 569 LEGTWLLTQLCRWGLTPLPKNRQELLDRVYRRDIYEAAIAAVGFPLITPSQRGFELFDAV 628

Query: 380 VWDGSDPADYARSFRLHA 397
            +D   P  Y   F + A
Sbjct: 629 PFDPDSPLRYLEQFEIKA 646