Pairwise Alignments

Query, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

Subject, 441 a.a., nitrate transport protein from Sinorhizobium meliloti 1021

 Score =  183 bits (464), Expect = 1e-50
 Identities = 133/386 (34%), Positives = 185/386 (47%), Gaps = 26/386 (6%)

Query: 31  GFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLRDKLVSGELDAAHSLYGLIYAV 90
           GF+ L D A ++ AA  GFAQ  G+TL L +  SWAN+RD+L   + D AH L  +  A 
Sbjct: 43  GFIPLVDAAVLIAAAEFGFAQREGITLELVKDVSWANVRDRLAFRQFDVAHMLSPMPVAA 102

Query: 91  HLGIGGVAPTDMAVLMGLNQNGQSINLSR---GLQQQG---------VITPEALDRHVHQ 138
            LG+G   P+       L + G +I LS    GL QQ          +   +AL   +  
Sbjct: 103 MLGLGS-NPSPTIAPFSLGRGGNAITLSTRLYGLMQQAGGLGGGEDALKNAKALAAVIRS 161

Query: 139 S----RTKLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGRIDG 194
           +    +  LT   T+P  +H     YWLA+ GI P +DV  VVVPPP     L AG IDG
Sbjct: 162 AGAAGKPPLTLGVTYPFSSHNYEFRYWLAAGGIDPDRDVKLVVVPPPMTSDALAAGAIDG 221

Query: 195 FCVGEPWCASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAILEAS 254
           FCVG PW   A ++  G  +AT Q IWP  PEKV+G    + +   +T   LV+A+  A+
Sbjct: 222 FCVGAPWNMVASERGVGRIVATKQDIWPSAPEKVIGMRPEWAEANRDTVSRLVVALDRAA 281

Query: 255 RFIEESSENRRSTAQLLSGREYLDAPLDCIEPRLLGTYD-DGLGNHWQDPHALRFFADGE 313
           R+ +E + NR   A++L+   ++ AP D I   L G +  D  GN     + L F A G 
Sbjct: 282 RWSDEPA-NRGRLAEVLAEERHVAAPADIIRRVLAGEFAIDPEGNRRVVENYLVFHA-GF 339

Query: 314 VNLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLPLYRQAAAALGIATKHPDMR-- 371
            N P  S  +W  +Q  RWG        +  A    +  LYR+A     +       R  
Sbjct: 340 ANYPRPSQALWTYSQMVRWGQTSLSRQRVDAAISAYRPDLYREALGKDALPADADAGRLE 399

Query: 372 ----SSQLIDGKVWDGSDPADYARSF 393
                 + +DG V+D     DY +SF
Sbjct: 400 GATDGDRFMDGHVFDPGRIEDYIKSF 425