Pairwise Alignments

Query, 74 a.a., hypothetical protein from Pseudomonas simiae WCS417

Subject, 126 a.a., Type III secretion inner membrane protein (YscQ,homologous to flagellar export components) from Pseudomonas fluorescens FW300-N2E2

 Score = 53.5 bits (127), Expect = 6e-13
 Identities = 28/66 (42%), Positives = 42/66 (63%)

Query: 1   MHLEILLQEQLISRRRLAAFAPGKVLPLMPEIIHCVEVRVNGQLLALGELVQLEDRLGVE 60
           + LE LL    +    L+    G+++PL  +    +EVR NG+ +ALGELVQL+ +LGVE
Sbjct: 56  VRLEFLLATHDLDLAALSQIIAGQLIPLADDAARRIEVRANGKPVALGELVQLDGQLGVE 115

Query: 61  LHEVYQ 66
           L +VY+
Sbjct: 116 LLKVYR 121