Pairwise Alignments

Query, 339 a.a., dihydroorotate dehydrogenase from Pseudomonas simiae WCS417

Subject, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis JJ

 Score = 92.8 bits (229), Expect = 1e-23
 Identities = 79/285 (27%), Positives = 141/285 (49%), Gaps = 31/285 (10%)

Query: 51  LDFPNPVGLAAG-LDKNGAAIDGFAQLGFGFVEIGTVTPRPQPGNPKPRIFRLPEAEAII 109
           ++F NPV LAAG + + G+A+   A+ G G V   +V    +PG+  P +  +      +
Sbjct: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEVEGG--FL 66

Query: 110 NRMGFNNLGVDHLLSRVQAAKYK------GILGINIGKNFDTPVERAVDDYLICLDKVYA 163
           N MG  N G D     ++  K +       I+G   GKN D+  ++A +        +  
Sbjct: 67  NAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKN-DSEFQKAAE-------VIAT 118

Query: 164 HASYVTVNVSSPNTPGLRSLQFGDSLKQLLEALRQRQEDLAVRHGKRVPLAIKIAPDMSD 223
           H   + +N+S P+  G     +G S+ Q  +    +    AV+    +P+  K+ P+++D
Sbjct: 119 HVDVLELNISCPHAGG----GYGSSIGQ--DPCLCKNVVSAVKDVSDIPVIAKLTPNVTD 172

Query: 224 EETVLVAQALVDSGMDAVIATNTTLSRVGVEGLAH----GDEAGGLSGAPVREQSTHIVK 279
            + +  A A+V++G D ++A NT    + ++  +     G++ GG+SG  ++  +   V 
Sbjct: 173 IKEI--ASAVVNAGADGIVAINTLGPGMVIDIESGVPILGNKVGGMSGKAIKPIAVKNVY 230

Query: 280 VLAAELAGRLPIIAAGGITEGRHAAEKIAAGASLVQLYSGFIYKG 324
            + +  A  +P+I  GGIT G  A E + AGAS VQ+ +G  Y+G
Sbjct: 231 DICS--AVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRG 273