Pairwise Alignments

Query, 754 a.a., 50S rRNA methyltransferase from Pseudomonas simiae WCS417

Subject, 708 a.a., 23S rRNA m(2)G2445 methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  577 bits (1487), Expect = e-169
 Identities = 319/751 (42%), Positives = 430/751 (57%), Gaps = 49/751 (6%)

Query: 5   FELFLTCPKGLEGLLIEEAVGLGLEEAREHTSAVRGMADMETAYRLCLWSRLANRVLLVL 64
           F  F   PKG E  L +E   LG E  RE  + V   A +   Y++ LW+RLA+R++L+L
Sbjct: 2   FNFFAAAPKGFEYALAKELETLGAENVRESVAGVYFSASLAQGYQITLWTRLASRIVLIL 61

Query: 65  KRFPMKDAEDLYHGVLDIEWADHMVPDGTLAVEFSGHGSGIDNTHFGALKVKDAIVDKLR 124
                + AE LY+    I+W  H     T +++F G G  I+N+ FGALK+KDA+VD+ R
Sbjct: 62  FTGECQSAEQLYNAAYTIDWPSHFSNRSTFSIDFHGTGGFINNSQFGALKIKDAVVDRFR 121

Query: 125 TPTGERPSIDKINPDLRIHLRLDRGEAILSLDLSGHSLHQRGYRLQQGAAPLKENLAAAI 184
                RP + K +PD+RI     RG+  + ++ SG +LHQRGYR   G APLKENLAA +
Sbjct: 122 DDDLSRPDVVKGHPDMRIDAHYGRGKITIGINFSGAALHQRGYRGNTGEAPLKENLAANM 181

Query: 185 LIRAGWPRIAAEGGALSDPMCGVGTFLVEGAMIAADMAPNLNRELWGFTTWLGHVPALWK 244
           L R+GW   A     L DP CG GT L+E A++A D+AP L RE +GF  W  H  ALW+
Sbjct: 182 LYRSGW---ADNPVTLLDPFCGSGTVLIEAALMACDIAPGLMRERFGFEHWRRHDQALWQ 238

Query: 245 KLHAEAAERAAVGMNKPPLWIRGYEADPRLIQPARNNIERAGLSHWIKVYQGEVGTFEPR 304
           ++  EA  RA++G  +  L   G + D R++  A+ N   AG+  +I          EP 
Sbjct: 239 QVIEEAKARASLGKTRCQLKFYGSDIDSRVVALAKRNANSAGVFDFIDFKVANALNLEPP 298

Query: 305 PDQNQKGLVICNPPYGERLGDEASLLYLYQNLGERLRQACMGWEAAVFTGAPDLGKRMGI 364
             +   G+V+ NPPYGERLG+  SLL LY  LGE+ +Q+  GW+  +     +L   + +
Sbjct: 299 VAE---GMVLTNPPYGERLGNVTSLLQLYFQLGEKFKQSYGGWKLGLLCSDMELVSSLKL 355

Query: 365 RSHKQYSFWNGALPCKLLLIKVNPDQFVTGERRTPEQRQAEREQAAYDQAPAEPQERQYN 424
           ++ KQ   +NGAL C   L  ++     T  RR                           
Sbjct: 356 KADKQMKMYNGALECAFNLYTLH----ATSTRRD-------------------------- 385

Query: 425 KNGNPIKPAPAPVVEQARLSEGGQMFANRLQKNLKLLGKWAKREGVDCYRVYDADMPEYS 484
                      PV    +  E    FANRL+KNLK L KWAKREG+D YR+YDAD+PEY+
Sbjct: 386 ----------IPVDTTGQGGEIAAPFANRLKKNLKQLEKWAKREGIDSYRLYDADIPEYN 435

Query: 485 MAIDLYHDWVHVQEYAAPKSIDPEKASARMFDALAAIPQALNIDKSRVVVKRRERQSGTK 544
           +A+D Y D+V VQEYAAP +I       R+ D L A+P+AL ID  ++V+K RERQ GT 
Sbjct: 436 VAVDRYLDYVVVQEYAAPSAIPEAVTKRRLTDVLLALPRALGIDPDKIVLKTRERQKGTN 495

Query: 545 QYERQSAQGKFTEVSEGGVKLLVNLTDYLDTGLFLDHRPMRLRIQKEAAGKRFLNLYCYT 604
           QY++   +      +E G    +NLTDYLDTGLFLDHR  R  + ++A  +  LNL+ YT
Sbjct: 496 QYQKLDGEKLELVTTEYGCSFKLNLTDYLDTGLFLDHRLTRKLVGEKAKNRDVLNLFAYT 555

Query: 605 ATASVHAAKGGARSTTSVDLSKTYLDWARRNFSLNGFSDKN-RLEQGDVMAWLETSRDEF 663
            +ASVHA KGGA+S T+VD+S TYL+WA+ NF LNG   +  + EQ D + W+     +F
Sbjct: 556 GSASVHAGKGGAKSVTTVDMSNTYLNWAKDNFMLNGLIGRQYQFEQADCLQWIRDCERQF 615

Query: 664 DLIFIDPPTFSNSKRMEGIFDVQRDHVQLLDLAMARLAPGGVLYFSNNFRKFALEDNLSE 723
           DLIFIDPPTFSNSKRME  FDVQRDHV LL      L PGG + FSNN RKF ++     
Sbjct: 616 DLIFIDPPTFSNSKRMEDSFDVQRDHVDLLASLKKLLRPGGEIVFSNNKRKFKMDMEALA 675

Query: 724 RYAVE--EISDKTIDPDFARNAKIHRAWKIT 752
              ++   I DK +  D+ARN +IH  W +T
Sbjct: 676 AAGLKAVNIDDKVLPMDYARNPQIHNCWVVT 706