Pairwise Alignments

Query, 799 a.a., nucleotide cyclase from Pseudomonas simiae WCS417

Subject, 849 a.a., PAS domain S-box protein from Synechocystis sp000284455 PCC 6803

 Score =  176 bits (445), Expect = 6e-48
 Identities = 120/346 (34%), Positives = 175/346 (50%), Gaps = 53/346 (15%)

Query: 487 LAIYLDITEQKRAYEALAARDRLLKKLSAHVPGGIFQFTLEPQDNWKFIYASDGMRDIYE 546
           L I  DIT+       L    + L++L+ H+PG I+QF + P   + F YAS+G+R IY 
Sbjct: 501 LGISADITD-------LLESQQRLQELARHIPGVIYQFRMRPDGTFHFPYASEGIRKIYG 553

Query: 547 IEPNILQQDAKRVIERIHPLDAERVRASIRLSALQLSHWREEYRVVLPQRGLRWIRGEAT 606
           + P  +++DA  V   +HP +   V  SI  SA  L+ W  EYRV      + W+ G AT
Sbjct: 554 VSPEEVKEDATPVFNVLHPDELPGVSRSIYESAANLTPWYYEYRVCFADGRVIWVLGYAT 613

Query: 607 PEELPAGGTLWHGYVSDISD----------------------------LKRVEEELRALS 638
           P     GGT+WHGY+ DI+D                            L+R  ++L  L 
Sbjct: 614 PRRESDGGTIWHGYIKDITDRKEEEYLLIKAKERAETAEQTLQKAQIRLERFNKKLSQLI 673

Query: 639 ITDSLTGIHNRRYFQDRLKAEMVRLNRTSGNLSVIMLDIDHFKRINDQHGHAVGDGVLQE 698
             D LT I NRR F  R+K E  RL+R    +S+IM DID FK  ND++GH  GD     
Sbjct: 674 DIDGLTKIANRRCFNVRIKQEWRRLSRAQVPISLIMFDIDCFKNYNDRYGHPEGD----- 728

Query: 699 LCR-RISQRLRR-----TDVFCRLGGEEFMVLCPHTDGEQAYSLAMELWASLRGAPM--- 749
           LC  R++Q  R+      D+  R GGEEF VL P TD + A  +A ++  ++    +   
Sbjct: 729 LCLIRVAQAARKAASRPADLVARFGGEEFAVLLPETDTKGAIMVAEKIIQAISQLAIAHE 788

Query: 750 -DPV-GIVTASFGVASWRVDEGIDG--LLLRADSAVYVAKQAGRDR 791
             P+ G +T S G+ +    + +    L+ +AD A+Y AK+ GR++
Sbjct: 789 ASPISGQITISLGIGTQFPSKELISRTLIKQADMALYEAKRRGRNQ 834