Pairwise Alignments

Query, 486 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas simiae WCS417

Subject, 487 a.a., serine-type D-Ala-D-Ala carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 80.1 bits (196), Expect = 2e-19
 Identities = 105/448 (23%), Positives = 191/448 (42%), Gaps = 44/448 (9%)

Query: 14  ILPVAFSVSAAPVNTTLPPSVQQALTKAKMQNTALSLVMIPLNGPGTPTVFNADVSVNPA 73
           +L ++  + A+P+    P +   A T    Q    SL++  +         N  +   PA
Sbjct: 16  LLSISGFLIASPIYAQTPLT---AATTKLPQGARYSLLIEDVALQQNTLELNTHLYYPPA 72

Query: 74  STMKLVTTYAALEMLGPNHQWKTEFYTDGTLSGGVLHGNLYLKGGGDPKLNMEKLWLLMR 133
           ST K++T  AA   LG     K  F+TD   SG     +  ++  GDP L    L  L++
Sbjct: 73  STQKILTALAAKLELGD----KFRFHTDLMRSGQ----DWIIRFSGDPTLTTADLTTLLK 124

Query: 134 DLRANGVQQVTGDLVLDRSFFN---QPLLPEFNDDGNDENKPFLVKPDALLVNLKA---L 187
            ++A    ++ GDL LD S F+   + +   ++  G   + P      A  +NL A    
Sbjct: 125 AMKAQSGGRIEGDLWLDNSVFSGYERAVGWPWDILGVCYSAP------ASAINLDANCIQ 178

Query: 188 RFVTRNDSGRVLVSVEPPIASIRIDNQ-VKVSNAKQCTGDVRYNPVTAADGSVTVTVSGQ 246
             +     G+  V V P    + + +Q + V+ ++Q +           D  +T T    
Sbjct: 179 ASIYTEPQGKTRVYV-PEHYPVHVQSQAISVTQSEQES--------LLCDLELTATPENH 229

Query: 247 LA-DGCSS------QTYLSLLDHATYTAGAVRAIWKELGGTIQGR-DIQAPVPKDAKVLA 298
              DGC +          ++ D   YT   V  +  +L   ++G+  +     K A+ +A
Sbjct: 230 YTLDGCLALRDKPLPLKFAVQDTGIYTQRVVYRLLSQLNIELKGKIKVGKANTKQAQKIA 289

Query: 299 RAFSPDLAEIIRDINKYSNNTMAQQLFLSLGAQFRNDADGDDAKAAQRVVRQWLAKKGIT 358
              S  L  +++ + + S+N +A  L  +LG +F +   G      Q + + + ++ GI+
Sbjct: 290 SHHSQPLPVLLKTMLQESDNLIADTLTKALGHRFYSQP-GSFTNGTQAIKQIFYSRTGIS 348

Query: 359 APHLVMENGSGLSRAERVSAREMATMLQAAWKSPYAAEYISSMPITGTDGTM--RKRLKT 416
                + +GSGLSR  R+  + M   L+  ++       I+ +P  G  GT+  R+ ++ 
Sbjct: 349 LEDTQLADGSGLSRNNRMRPQVMLETLRYLYQHEAELGLIAMLPSAGESGTLQYRRSMRA 408

Query: 417 TAMRGEAHVKTGTLNTVRAIAGFSRDNN 444
             + G+   K+G+L     +AGF  D N
Sbjct: 409 PQISGQIKAKSGSLYGTYNMAGFVMDEN 436