Pairwise Alignments

Query, 396 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 387 a.a., benzoate transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  283 bits (725), Expect = 5e-81
 Identities = 145/371 (39%), Positives = 215/371 (57%)

Query: 18  SAVVAGFIAMMTGYTSSLVLMFQAGQAAGLTTAQISSWIWAISIGMAVCSIGLSLRYRTP 77
           S + AGF  ++ GYTSS+V++ QA  A+G    QI SW+  + + M + SI  S  Y+TP
Sbjct: 9   SHLSAGFTTVLVGYTSSVVIVIQAATASGANPTQIESWLLTLGVVMGLTSILYSWFYKTP 68

Query: 78  ITIAWSTPGAALLITSLGGVSYGEAIGAYITCAVLVTICGMTGSFEKLVKRIPASLAAAL 137
           I  AWSTP A +L  S G  S    IGA++    L T+ GM     + + +IP  L  A+
Sbjct: 69  IVTAWSTPAAVMLAASAGQYSLPVVIGAFMFSGALFTLTGMLAPLTRALSKIPVPLGTAM 128

Query: 138 LAGILFKIGSEIFVAAQHRTGLVLGMFFTYLVIKRLSPRYAVLAALLIGTALSGLMGLLD 197
           L  IL    ++ F        L   +F +YL+ K L PRY +L  LL+    +  +G   
Sbjct: 129 LGAILLPFCAKAFTPLTDTPALFALLFTSYLLAKHLVPRYTMLVLLLVSLGSALALGSFQ 188

Query: 198 FSGFHLEVATPVWTTPHFSLAATISIGIPLFVVAMTSQNMPGVAVLRADGYNVPASPLIT 257
            +   L +ATP+W  P F   A +++ +PL+++ M SQN+PG+A+L++  Y+ P  P++ 
Sbjct: 189 HADLALRIATPIWVMPEFDWLAILNLALPLYLITMLSQNLPGIAMLKSYQYDAPIKPILV 248

Query: 258 ATGLASLVLAPFGSHGINLAAISAAICTGPHAHEDRNKRYTAAVWCGVFYGIAGVFGATL 317
            TGLA+L+ APFG   +NLAAISAAIC      +D+ +RY A +W G FY +AG+F A +
Sbjct: 249 GTGLATLMSAPFGGFSVNLAAISAAICMNEDVDQDKAQRYRAVLWAGGFYLLAGIFAALV 308

Query: 318 AALFAALPKELVLSIAALALFGSIINGLSIAMNEPKEREAALITFMVTASGLTLFSIGSA 377
             LF ALPK +   +A LAL G+++  L  A    + RE AL+TF++T SG TLF + + 
Sbjct: 309 VNLFLALPKPISAMLAGLALLGTLMMCLQSAFKIDEYREPALLTFVITLSGATLFGMSAT 368

Query: 378 FWGIVAGVLTL 388
             G+V G+  L
Sbjct: 369 LIGLVIGLAYL 379