Pairwise Alignments

Query, 1162 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417

Subject, 1195 a.a., condensin subunit Smc from Synechococcus elongatus PCC 7942

 Score =  306 bits (783), Expect = 8e-87
 Identities = 299/1224 (24%), Positives = 540/1224 (44%), Gaps = 134/1224 (10%)

Query: 3    LKCIKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMT 62
            +K I+L+ FKSF   T++        V GPNG GKSNI+DA+ + +G SS+K +R + + 
Sbjct: 4    IKQIELSHFKSFGGTTSLPLLPEFTVVTGPNGSGKSNILDALLFALGLSSSKGMRADRLP 63

Query: 63   DVIFNGSTSRKPVSQASIELVF--------------DNSDGTLIGEYAAYAEISIRRKV- 107
            D++ +   SR   S++++E +               +  +G   G     AE ++ RK+ 
Sbjct: 64   DLVNSTYASR---SRSTVETLVTVTFALDDWQPEAEETEEGEGTGLQPGMAEWTVSRKLR 120

Query: 108  ---TRDSQNSYFLNGTKCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFI 164
               +    ++Y +NG  C  + + +      + P  Y+++ QG ++ +I   P D R  I
Sbjct: 121  VTPSGTYTSTYAMNGEACTLQQLHEQLSRLRIYPEGYNVVLQGDVTNIISMSPRDRRQII 180

Query: 165  EEAAGISKYKERRRETENRIRRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGE 224
            +E AG++++  +  + + ++    E   R   + +EL  Q +RL +  + A+KYQ  + E
Sbjct: 181  DELAGVAQFDRKIEQAKGKLEAVKEREDRCRIVEQELIEQRDRLAKDREKAQKYQALRQE 240

Query: 225  ERQLKAQLSALRW-------QALNDQVGQREAIIGTQEISFEALVAEQRNADASIERLRD 277
            +   ++  + LRW       QAL   + Q      T + + + L  + +  +A+++RL  
Sbjct: 241  QATKQSWEAVLRWRAGQRQVQALQRSLAQLATDAATDQQTQQTLEQQIQQTEATLDRLNQ 300

Query: 278  GHHDLSERFNLVQGRFYSVGGDIARVEQSIQHGQQRLRQLQDDLKEAERARLETESHLGH 337
                L E   L   +  +        ++  Q  QQ L + Q   ++  +A L+T++ L  
Sbjct: 301  RVKALGEEELL---KLQAALAQQEAEQRQSQRQQQELVESQTQTQQQIQALLQTQAQLQT 357

Query: 338  D--------RTLLLTLGEELDMLTPEQEITSAAAEEAAAALEESETTMHGWQEQWDTFNL 389
            +        RTL  T+ + L    P+ +     A E   A  +S   +    + W T   
Sbjct: 358  EGQQQAEQARTLQTTIAQTLQ---PQYQ----QALEQVEAARQSAHALAAQSQDWVT--- 407

Query: 390  KSAEPRRQAEVQQSRIQQLETSMERLAERQRRLQE--ERVLLAADPEDAAIMELSEQLAE 447
            +    R+QA+   ++++       +L ERQ +LQ+  E    A     A +   +EQ   
Sbjct: 408  RQTSLRQQADAIAAQVEPQRAEQAQLQERQTQLQQQLEATQSALVTVTAELETETEQAEG 467

Query: 448  SEMTLEELEASEEQQVERLEQLRQQLQQATQAQQQAQGDLQRLNGRLASLEALQQAALD- 506
                L + EA+     ++L +L ++LQ   + + +   + +    +L   E+L+QA  + 
Sbjct: 468  DRAALSQAEAAVVTAADQLVRLEEELQIQQETRDRLLKEQRDKQRQLDRQESLRQAMQET 527

Query: 507  PGTGTAEWLRDQHLAERPRLAEGL-KVEAGWELAVETVLGADLQAVLVDDFG----GFDL 561
             GT  A  + D  L     L   L +VE  ++LA+E   G  L  ++VDD G    G +L
Sbjct: 528  QGTAAARLILDTGLPGVHGLVAQLGRVEPRYQLALEVAAGGRLGYLVVDDDGVASAGIEL 587

Query: 562  AGFAQ-GDLRLL---------SPAADGTRVPGSLLDKVEAAIDLSP--------WLGQVK 603
                + G +  L          P     + P  L+D   A +D            LG   
Sbjct: 588  LKQKKAGRITFLPLNRIRAGKQPEIPRWQQPEGLVDLAIALVDCDDRYREVFKFVLGGTV 647

Query: 604  PVESLEQALAQRGQ---------------LAAGESLISRDGYWVGRHFLRVRRASEAESG 648
              E L+QA    GQ                  G S+  R G   G  F        AE  
Sbjct: 648  VFERLDQARRYMGQYRIVTLDGELLETSGAMTGGSIARRSG---GLSFGSPDSGESAEVR 704

Query: 649  VLARGQEIVNLIAEREE-----REATLESLETELQTLRATQRQQETGREHLRRLLQDEAR 703
             +    E + +I +R E      +A ++   + L   R  QR+Q+   +  ++ LQ   +
Sbjct: 705  AIRDRLEQLEVILDRSELQILNLQAAIKDAASTLSDRRQQQREQQLTVQQRQQTLQRLQQ 764

Query: 704  QQGELKAQLSASKAKVEQLTLRRTRLDEEVAEMGEQRALEHEQIGEARLHLQEALDS-MA 762
            QQ +L A+L   + +  Q   R       +A +  +     +Q+   R  L E  DS + 
Sbjct: 765  QQQQLNAELQQRQQQASQAQAR-------LAALALELPAALKQLKTLRQALAELEDSPIH 817

Query: 763  LDTEQRELLLAQRDSLRERLDRVRQEARQHKDHAHQLAVRLGSLKAQHASTAQALERLEM 822
             + +QR+ LL Q+++L ++ +   ++A Q      QL      L+ +  +    + +L  
Sbjct: 818  GEWQQRQTLLQQQEALLQQQETALRQAEQ---QLQQLQTDQKRLQERAIAAQTQVSQLRQ 874

Query: 823  QSERLTEKREQLSLNLEEGEAPLEELRLKLEELLDKRMTVDEELKTAQIALEDADRELRD 882
            Q      +  QL     +    + +L+ +  +L             AQ+  E  DR+   
Sbjct: 875  QQGEQLNRLAQLDEQQRQQATAIAQLQQRQAQL------------EAQLGQEKVDRD--R 920

Query: 883  AEKRRTQAEQQSQLIRGQLEQQRMEWQALTVRRKTLQDQLLEDGYDLHGVLNTLTAQANE 942
             E++  +   Q Q +  Q E+++ + Q L  +   L+ QL  +  +L   L  +     +
Sbjct: 921  TERQLQEQRSQRQNLVWQQEKRQQQQQELQQQLTDLEVQLQAEQQELPQPLPDIPEMVQQ 980

Query: 943  KEAE---EELERIAARIQRLGAINLAAIDEYQQQSERKRYLDAQ----DADLVEALDTLE 995
            +  E    EL  +A RIQ +  +N+ A++EY++   R   L  +    +A+  E L  +E
Sbjct: 981  QGIEALQHELRSLAKRIQAMEPVNMLALEEYERTQARLEELSEKLTTIEAERTELLLRIE 1040

Query: 996  NVIRKIDKETRNRFKDTFDQINSGLQALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPG 1055
            N         R  F ++F+ I+   Q +F  +  G  +      ED   +G+ ++A P G
Sbjct: 1041 N----FTTLRRRAFMESFEAIDRNFQEIFAHLSDGDGSLQLDNPEDPFSSGLNLIAHPKG 1096

Query: 1056 KKNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQ 1115
            K    +  +SGGEK+LTAL+ +FA+ +  P+PF  LDEVD+ LD ANV R AR++++ +Q
Sbjct: 1097 KPVRRLASMSGGEKSLTALSFIFALQRYRPSPFYALDEVDSFLDGANVERLARVIRQQAQ 1156

Query: 1116 TVQFIYITHNKIAMEMADQLMGVT 1139
              QFI ++H +  +E A++ +GVT
Sbjct: 1157 AAQFIVVSHRRPMIEAAERTIGVT 1180