Pairwise Alignments

Query, 1162 a.a., chromosome segregation protein SMC from Pseudomonas simiae WCS417

Subject, 1189 a.a., chromosome segregation protein SMC from Methanococcus maripaludis S2

 Score =  257 bits (657), Expect = 3e-72
 Identities = 286/1237 (23%), Positives = 548/1237 (44%), Gaps = 143/1237 (11%)

Query: 6    IKLAGFKSFVDPTTVNFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGESMTDVI 65
            I +  FKSF + + +  P    A++GPNG GKSN ID + +V+G++SAK+LR      +I
Sbjct: 7    IHMKNFKSFKN-SKLKIPDGFTAILGPNGSGKSNTIDGICFVLGKTSAKSLRAGKFNQLI 65

Query: 66   FNGSTSRKPVSQASIELVFDNSDGTLIGEYAAYAEISIRRKVTRDSQNSYFL-------- 117
               +  R+  + A + L+FDN D  +  +     ++ I RKV  +  N+Y+L        
Sbjct: 66   TYHNGKRE--NFAEVTLIFDNKDRKMPVDSD---KVGISRKVKINGDNNYYLIWNEEKEV 120

Query: 118  --NGT----------KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEDLRNFIE 165
              NG           K ++ +I D+     L    ++II QG + K+I+  P + R  I+
Sbjct: 121  KENGEIKTVKEEKRKKVKKSEILDVIGKISLSADGFNIILQGDLIKIIDTTPNERRKIID 180

Query: 166  EAAGISKYKERRRETENRIRRTHENLARLTDLREELERQLERLHRQAQAAEKYQEYKGEE 225
            E +G++++ E+  + +  + +  E + ++     E++  LE+L ++ + AE + +   E 
Sbjct: 181  EISGVAEFDEKGEKAKKELEKAREFIEKIDIRINEVKNNLEKLKKEKEDAETHVKLTEEL 240

Query: 226  RQLKAQLSALRWQALN---DQVGQREAIIGTQEISFEALVAEQRNADASIE-RLRDGHHD 281
            +  K  L++ + + LN   ++  +    +   ++ F   ++E       I  RL++  ++
Sbjct: 241  KATKYILTSKKIEFLNGILEKTKEEIEALKEMKVCFLKEISEYDAKSNDIRNRLQNLINE 300

Query: 282  LSERFNLVQGRFYSVGGDIARVEQSIQHGQQRLRQLQDDLKEAERAR-------LETESH 334
            L+E+ N        +   I  +E ++ + ++ L    DDLK             +ET   
Sbjct: 301  LNEKGN---EEIMELHKSIKEMEVTVDNDKKSLNGALDDLKNVNSQSEKKGQDLVETRQK 357

Query: 335  LGHDRTLLLTLGEELDMLTPEQEITSAAAEEAAAALEESETTMHGWQEQWDTFNLKSAEP 394
            +   RT  L    E++ L  E E      ++  + +EESET     ++Q    + +  E 
Sbjct: 358  IETIRTETLQKEAEINALKTEMENLETEKKKLKSKVEESETQTEILKQQERKLSERINES 417

Query: 395  RRQAEVQQSRIQQLETSMERLA-------ERQRRLQEERVLLAADPEDAAIMELSEQLAE 447
            + +    ++    LE  + + +       E    LQ+E   + ++ ED   +       E
Sbjct: 418  QNELYNFKNEFNALENEINKKSFNLAKNKETIETLQKELEEIRSEHEDTKSL-----YKE 472

Query: 448  SEMTLEELEASEEQQVERLEQLRQQLQQATQAQQQAQGDLQRLNGRLASLEALQQAALDP 507
             E    ELE S+++ V  LE  ++   +      ++  D  + N ++ +++ ++  +LD 
Sbjct: 473  LEDVAVELEYSKKKVVTLLENKKEYQDRL----DKSHADYIKENAKIKAMKDMEDFSLDR 528

Query: 508  GTGTAEWLRDQHLAERPRLAEGL-KVEAGWELAVETVLGADLQAVLVD--DFGGFDLAGF 564
               +   + +  L     +A  L K +A ++ A+E   G  L  ++V   D G   +   
Sbjct: 529  AVKS---VLEAKLPGVVDIAGNLGKTDAEYKTAIENAGGNRLNYIVVKRMDDGARAIQYL 585

Query: 565  AQGDL---------RLLSPAA---DGTRVPGSLLDKVEAAIDLSPWL----GQVKPVESL 608
             + +L         R+  P A   D   V G  +D VE   +         G    VE+L
Sbjct: 586  KKNNLGRTTFLPLDRINGPEALYLDDEGVVGRAIDLVEFKPEHENLFRYVFGNTIIVENL 645

Query: 609  EQALA----QRGQLAAGES-LISRDGYWVGRHFLRVRRASEAESGVLARGQEIVNLIAER 663
            + A       R +    E  +I   G  +G    R R+ S  +  +     ++  L  + 
Sbjct: 646  DYAKTLSKDHRARFVTLEGEVIEPSGAMIGG---RSRKKSVIKVDIDT--SKLEKLAEDI 700

Query: 664  EEREATLESLETELQTLRATQRQQETGREHLRRLLQDEARQQGELKAQLSASKAKVEQLT 723
             E + TL   + E++ L+       T +  L   L+     + + +  L+ +  K+++L 
Sbjct: 701  SELDGTLSETKDEIERLQNKNATYSTRKMELESRLKIIKDLEHKKEGILTNNGVKIKELE 760

Query: 724  LRRTRLDEEVAEM-GEQRALEHEQIGEARLHLQEALDSMALDTEQRELLLAQRDSLRERL 782
            L   +L+EE+  + G +  LE +        ++E    ++  T QR              
Sbjct: 761  LESRKLEEELDYLEGSKEELERK--------IEEFTKKISGFTSQR-------------- 798

Query: 783  DRVRQEARQHKDHAHQLAVR------LGSLKAQHASTAQALERLEMQSERLTEKREQLSL 836
            DR+ +E    ++  H   ++      +   K ++    +      +  E L  K  +L+ 
Sbjct: 799  DRISEEIASFENSEHSKRIKVIDENIIAFEKKKNEFENEIKRDAVLIKEVLIPKISELNS 858

Query: 837  NLEEGEAPLEELRLKLEELLD-KRMTVD---EELKTAQIALEDADRELRDAEKRRTQAEQ 892
            N++E    L E R  LE+ +   +  V+   E LK  +   ED  ++LR+  +++   E+
Sbjct: 859  NIKE----LSEKRTILEQNIQFYKNNVEKNFEILKNKKERYEDLTKDLRELTEKKEAFEK 914

Query: 893  QSQLIRGQ-------LEQQRMEWQALTVRRKTLQDQLLEDGYDLHGVLNT------LTAQ 939
            + +++ G+       + Q   +  +L++ +   + +L E+   L+   N       +T++
Sbjct: 915  ELEILNGEKRRVYGRINQNESQINSLSIDKAKYETRLEEEDRKLYVCENIEQISEDITSK 974

Query: 940  ANEKEA---EEELERIAARIQRLGAINLAAIDEYQQQSERKRYLDAQDADLVEALDTLEN 996
              E +    E     +   I++L  +N+ AID+YQ   +R   L  +  D         +
Sbjct: 975  IKEFDVDALESHQIDLEGHIKKLEPVNMRAIDDYQYIVDRYDELFEKRTDYENEEKKYLH 1034

Query: 997  VIRKIDKETRNRFKDTFDQINSGLQALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGK 1056
            +I ++ K  +  F D + ++    + ++ ++ G G   LE   ED    G+ I A P  K
Sbjct: 1035 LIEEVSKRKKEVFMDVYLKVAENYEKIYTEIGGSGKLSLE-NPEDPFSGGLLIDASPMNK 1093

Query: 1057 KNSTIHLLSGGEKALTALALVFAIFKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQT 1116
            K  ++ ++SGGEK+LTALA +FAI  LNPAPF +LDEVDA LD  N G    ++K  S+ 
Sbjct: 1094 KLQSLDVMSGGEKSLTALAFLFAIQHLNPAPFYVLDEVDAALDTKNAGLIGEMIKNASKD 1153

Query: 1117 VQFIYITHNKIAMEMADQLMGVTMHEPGCSRLVAVDV 1153
             QFI I+H +  +  +D + GV M E G S+LV + +
Sbjct: 1154 SQFIVISHREQMISKSDVMYGVCM-ENGLSKLVGLKI 1189