Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 304 a.a., putative integral membrane protein from Phaeobacter inhibens DSM 17395

 Score = 76.3 bits (186), Expect = 9e-19
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 22/277 (7%)

Query: 20  WAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGIGRPRLWDLPWLLV------ 73
           W  S + V + L  + P  +A LR LI ++ +  V  VMGI  P L      ++      
Sbjct: 20  WGASFMAVSLALRGFPPMTIAALRILIGALCLLAVIRVMGIQLPTLRTHDGRIIWACAFG 79

Query: 74  LSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLK-ERVSLWRWSCVLLG 132
           + FF   L  T L++GQ +V +G + V     PLF + +A   +  E ++L R    L+G
Sbjct: 80  MGFFSNALPFTLLSWGQTYVASGFAGVCMAVVPLFVLPLAHLLVPGEHMTLRRTISFLIG 139

Query: 133 LLGVLVVIWGDHGVGNIDPRGLLLLLAAVSWSLYFAIQKHYAHRYSPLTM----ACYMVW 188
             GV+V+I  D           L  LA +  +L +AI          + M    A  ++ 
Sbjct: 140 FAGVVVLIGLDAFRSAGTDFESLARLACLGAALCYAIGSIITRLCPKVNMLSLSAAALLC 199

Query: 189 GGTLMLCVNL--PGLSSAVVQAPLPENLAVLVLGIFPSALAYLAWGYVLKHVEVSRASVA 246
           G  +M    L   G+       PL    AV+ LG+ P+ALA +    V +    +  S  
Sbjct: 200 GAAMMTPAALWAEGMPELPAMQPLA---AVIYLGLLPTALAQVLLVQVARSAGPAFLSTV 256

Query: 247 MYLIPPVAMMMAATLLGEHI------TLQVVLGGVIV 277
            Y +P  +++  A LLGE +       L ++LGG+++
Sbjct: 257 NYQVPVWSVIFGAALLGETLPPQLFAALALILGGLLL 293



 Score = 35.8 bits (81), Expect = 1e-06
 Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 21/142 (14%)

Query: 156 LLLAAVSWSLYFAIQKHYAHRYSPLTMACYMVWGGTLMLC-------VNLPGL---SSAV 205
           LL   V W   F         + P+T+A   +  G L L        + LP L      +
Sbjct: 13  LLFLGVIWGASFMAVSLALRGFPPMTIAALRILIGALCLLAVIRVMGIQLPTLRTHDGRI 72

Query: 206 VQAPLPENLAVLVLGIFPSALAY--LAWGYVLKHVEVSRASVAMYLIPPVAMMMAATLL- 262
           + A          +G F +AL +  L+WG    +V    A V M ++P   + +A  L+ 
Sbjct: 73  IWA------CAFGMGFFSNALPFTLLSWGQT--YVASGFAGVCMAVVPLFVLPLAHLLVP 124

Query: 263 GEHITLQVVLGGVIVLASVAAI 284
           GEH+TL+  +  +I  A V  +
Sbjct: 125 GEHMTLRRTISFLIGFAGVVVL 146