Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 282 a.a., protein of unknown function DUF6 transmembrane (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 22/290 (7%)

Query: 1   MNTPSPLKLTLVIASVILCWAYSPIGVHMGLLS--YGPGQLALLRFLIASVFMAGVAL-- 56
           M   SPL+L L++A  +  +A + +     L     GP   A +R    ++ +A + +  
Sbjct: 1   MTGASPLRLFLLVALTMTAFAANSLLNRAALAGGEIGPAAFAAIRLGSGALVLALLVMRT 60

Query: 57  -VMGIGRPRLWDLPWLLVLSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFF 115
             + + +P  W       +    + L+    +Y    + AG  +++       ++     
Sbjct: 61  RPLRLRKPGRW-------IGVGSLALYMAGFSYAYLSLDAGLGALILFGGVQITMFAGAL 113

Query: 116 CLKERVSLWRWSCVLLGLLGVLVVIWGDHGVGNIDPRGLLLL-LAAVSWSLYFAIQKHYA 174
             ++ + + RW    L L G+ +++W    VG  DP GL L+ LAAV W +Y     H  
Sbjct: 114 LSRDAIPVTRWLGAGLALAGLALLLWPG-AVGRPDPLGLALMSLAAVGWGIY---SLHGR 169

Query: 175 HRYSPL--TMACYMVWGGTLMLCVNLPGLSSAVVQAPLPENLAVLVLGIFPSALAYLAWG 232
               PL  T A +++   TL LC+ +  +    V   L   +  ++ G   S L Y  W 
Sbjct: 170 GSTEPLADTAANFVL---TLPLCLLVVAIWPDGVAISLWGIVLAVICGAVTSGLGYALWY 226

Query: 233 YVLKHVEVSRASVAMYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASVA 282
            VL  +  SRA+VA   +P +A +    LLGE ITL  VL  V+VL  VA
Sbjct: 227 TVLPQLGASRAAVAQLTVPVIASLGGLLLLGEAITLLSVLATVLVLGGVA 276