Pairwise Alignments

Query, 319 a.a., transporter from Pseudomonas simiae WCS417

Subject, 309 a.a., membrane protein from Burkholderia phytofirmans PsJN

 Score = 90.9 bits (224), Expect = 4e-23
 Identities = 79/279 (28%), Positives = 133/279 (47%), Gaps = 12/279 (4%)

Query: 8   KLTLVIASVILCWAYSPIGVHMGLLSYGPGQLALLRFLIASVFMAGVALVMGIGRPRLWD 67
           ++ L +A V L W  + + VH+ L S+ P  L+ +R L A V +   A       P   +
Sbjct: 24  QVALALAVVYLVWGSTYLAVHVALGSFPPLLLSGMRNLFAGVGLFIFAARRNPVWPSAAE 83

Query: 68  LPWLLVLSFFGVFLHHTSLNYGQQFVTAGASSVLAQSAPLFSVLIAFFCLKERVSLWRWS 127
           +    ++    V L    L YG + V  G ++V+  + PLF+ +IA    + ++    W 
Sbjct: 84  IRNAGLVGTMLVGLSSGMLAYGMRTVGTGTAAVMVATVPLFATVIAAVAGR-KIGRGEWF 142

Query: 128 CVLLGLLGVLVVIWGDHGVGNIDPRGLLLLLAAVSWSLYFAIQKHYAHRYSP-----LTM 182
            V LGL+G+ ++  GD   G+         LA +  +L++A   H A R        L+ 
Sbjct: 143 AVGLGLVGIAILSHGDSAPGSAGGS-----LAILCGALFWAGGAHLAGRLKLPSDLFLST 197

Query: 183 ACYMVWGGTLMLCVNLPGLSSAVVQAPLPENLAVLVLGIFPSALAYLAWGYVLKHVEVSR 242
           +  +  GG +   V        +    LP  LA + L +  +  AY+A+G++++H     
Sbjct: 198 SLQIGLGGAMSTLVAWVSGERMLEVHFLPV-LAFIYLMLIGTMAAYVAYGFLIRHTSPII 256

Query: 243 ASVAMYLIPPVAMMMAATLLGEHITLQVVLGGVIVLASV 281
           AS  MY+ P VA+ + A LLGE +T   V+  V++LASV
Sbjct: 257 ASSCMYVNPVVAVALGALLLGEPVTRSTVVATVVILASV 295