Pairwise Alignments

Query, 770 a.a., membrane protein from Pseudomonas simiae WCS417

Subject, 388 a.a., MMPL family transporter from Methanococcus maripaludis S2

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 12/168 (7%)

Query: 233 AASGLLYAANGQQQATREITWVGGGATVGILLLLLLAFRRW-RVLLAFVPVLVGMLFGAV 291
           A S LL     + QA       G  + + I  +LLL FR   + +L  +PV+V +++ A 
Sbjct: 202 ALSELLKRMMDESQAV-----TGLASLLAIFTILLLYFRNIVKSVLPLIPVVVAVIWAAG 256

Query: 292 ACVALFGHMHVMTLVLGSSLIGVAVDYPLHYLSK-SWSMRPWRSWP-----ALRLTLPGL 345
           +       M   T V+GS L+G+ +DY +H   +    +   +S       A+  T   +
Sbjct: 257 SMAIFKIPMDTATSVMGSLLLGLGIDYGVHLFHRYEEELGDGKSMDEAINIAVVSTGSAV 316

Query: 346 SLSLATSCIGYLALAWTPFPALTQIAVFSAAGLVGAYLSAVCLLPALL 393
            ++ AT+  G+ AL   P   +  +      G+     + +CLLP L+
Sbjct: 317 LVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFFCMAAVICLLPPLI 364



 Score = 28.5 bits (62), Expect = 7e-04
 Identities = 34/163 (20%), Positives = 71/163 (43%), Gaps = 22/163 (13%)

Query: 613 PGVQLVDR----LGDLNRVFADTQISAAELKLMSCVLIVLLLILPFGFGGALRIVALPLL 668
           PGV+++      L +L +   D   +   L  +  +  +LLL         L ++ + ++
Sbjct: 191 PGVEVITTGTPALSELLKRMMDESQAVTGLASLLAIFTILLLYFRNIVKSVLPLIPV-VV 249

Query: 669 AALCSLASLGWLGQPL-TLFSLFGLLLVTAISVDYAILM----REQIGGPA-------VS 716
           A + +  S+     P+ T  S+ G LL+  + +DY + +     E++G          ++
Sbjct: 250 AVIWAAGSMAIFKIPMDTATSVMGSLLL-GLGIDYGVHLFHRYEEELGDGKSMDEAINIA 308

Query: 717 LLGT----LLAALTTWLSFGLLAVSSTPAVSNFGLSVSLGLAF 755
           ++ T    L+   TT   F  L ++    ++N G   +LG+ F
Sbjct: 309 VVSTGSAVLVTTATTMAGFAALTIAPLSMMANMGKVCTLGIFF 351