Pairwise Alignments

Query, 460 a.a., coproporphyrinogen III oxidase from Pseudomonas simiae WCS417

Subject, 377 a.a., Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB from Pseudomonas fluorescens FW300-N2E2

 Score = 90.1 bits (222), Expect = 1e-22
 Identities = 75/288 (26%), Positives = 125/288 (43%), Gaps = 22/288 (7%)

Query: 53  PLSLYVHVPFCANICYYCACNKVITKDRGRAQAYLQRLEQEIQ--LMACHLDPKQRVEQL 110
           PL+LYVH+P+C   C YC  N      +   + Y+  L  ++   L A H  P   +  +
Sbjct: 4   PLALYVHIPWCVRKCPYCDFNSHTASPQLPEEEYVDALLADLDQDLHAAHGRP---LSSI 60

Query: 111 HFGGGTPTFLSHDELRQVMGCLRQHFNLLDDDSGDYGIEIDPREADWATMGLLRELGFNR 170
            FGGGTP+  S   L +++  +        D   +  +E +P   +       R LG NR
Sbjct: 61  FFGGGTPSLFSAQALGRLLKGVEARIPFAQDI--EITLEANPGTFEQEKFVAYRALGINR 118

Query: 171 VSIGLQDLDPEVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPKQTPINFARTV 230
           +SIG+Q        A+ R+ + +E       AR   F + N+DL++GLP Q+  +    +
Sbjct: 119 LSIGIQSFQQAKLEALGRIHNGDEAVRAAGMARQAGFDNFNLDLMHGLPDQSLDDALGDL 178

Query: 231 EEVIKLQPDRLSVFNYAHLPERFMPQRRINTEDLPSPASKLLMLQTTIEQLTQAGYRYIG 290
            + I L+P  LS +     P         NT     P +  L    T+  + +AG   + 
Sbjct: 179 SQAIALKPTHLSWYQLTLEP---------NTVFWNQPPT--LPEDDTLWDIQEAGQALLA 227

Query: 291 MDHFALPDDELAIAQEEGTLQRNFQGYTTHGHCDLIGLGVSAISQIGN 338
              +A    E++   + G   R+   Y + G  D IG+G  A  ++ +
Sbjct: 228 EHGYA--QYEVSAYAQPGRAARHNLNYWSFG--DFIGIGAGAHGKLSH 271