Pairwise Alignments

Query, 325 a.a., cytochrome Cbb3 from Pseudomonas simiae WCS417

Subject, 293 a.a., FixP3 Diheme c-type cytochrome from Sinorhizobium meliloti 1021

 Score =  143 bits (361), Expect = 4e-39
 Identities = 95/293 (32%), Positives = 150/293 (51%), Gaps = 34/293 (11%)

Query: 39  TVGHSFDGIEEYDNPLPKWWFMLFVGTIIFALGYLALYPGLGNWKGLLPGYSYLDNDKQT 98
           T GH ++GI+E D P+P+   +  V T +FAL           W  LLP +        T
Sbjct: 14  TTGHEWNGIKELDTPVPRGVLLFLVVTHVFAL----------LWWVLLPTWPL-----GT 58

Query: 99  PFANGQTGWTGVHEWEKEMAKSDAKFGPIFAKFASMPIEEVAKDPQAL----KMGGRLFA 154
            +  G  G    +  E+++A + A       +  ++  E++  D Q +      G +LF 
Sbjct: 59  TYTKGLLGIDERNVVEEKLAAAAAARAVWEKRIDTLSYEQIRADEQLMATVRSTGHQLFG 118

Query: 155 SNCSVCHGSDAKGAYGFPNLTDADWRWGGEPATIKETIMKG--------RHAVMPAW--L 204
            NC+VCHG D KG   +P+LTD DW WGG P  I++T+  G        R A MP++   
Sbjct: 119 DNCAVCHGIDGKGRSNYPDLTDDDWLWGGGPEDIEQTLRVGINTRHPESRVAQMPSFGRE 178

Query: 205 DILKEQGVSDVAAFV--VTNLDGRKLPEGVKADVANGEKLFAANCVACHGPAGKGTPAMG 262
            +L+   V DVAA+V  +TN  G   PE +   +  G ++F  +C ACHG   +G+  +G
Sbjct: 179 QMLERNQVRDVAAYVYSLTN-PGYSTPENI-GRIEAGREVFLTSCAACHGENARGSREVG 236

Query: 263 APDLTHPGAFIYGSSFAQLQQTIRWGRQGQMPAQEQLQGNDKVHLLAAYVYSL 315
           AP+LT    +IYG +   + +++  GRQG MP  ++   + ++ +LA Y+ SL
Sbjct: 237 APNLT-DAYWIYGGTMQTIIESVHGGRQGHMPTWDERLTSAEIKILALYINSL 288



 Score = 52.0 bits (123), Expect = 2e-11
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 13/91 (14%)

Query: 237 ANGEKLFAANCVACHGPAGKGTPAMGAPDLTHPGAFIYGSSFAQLQQTIRWG-------- 288
           + G +LF  NC  CHG  GKG      PDLT    +++G     ++QT+R G        
Sbjct: 111 STGHQLFGDNCAVCHGIDGKGRS--NYPDLTDDD-WLWGGGPEDIEQTLRVGINTRHPES 167

Query: 289 RQGQMPA--QEQLQGNDKVHLLAAYVYSLSH 317
           R  QMP+  +EQ+   ++V  +AAYVYSL++
Sbjct: 168 RVAQMPSFGREQMLERNQVRDVAAYVYSLTN 198