Pairwise Alignments

Query, 202 a.a., cbb3-type cytochrome c oxidase subunit II from Pseudomonas simiae WCS417

Subject, 243 a.a., cbb3-type cytochrome c oxidase subunit II from Sinorhizobium meliloti 1021

 Score =  234 bits (596), Expect = 1e-66
 Identities = 119/226 (52%), Positives = 148/226 (65%), Gaps = 29/226 (12%)

Query: 2   KHEVVEKNIGLLAFFMVIAVSIGGLTQIVPLFFQDVTNKPVEGMKPRTALELEGRDVYIA 61
           KH ++E+N  LL    ++ VSIGG+ +I PLF+ + T + VEGM+P + LEL GRD+YI 
Sbjct: 6   KHAILERNATLLLIGSLLVVSIGGIVEIAPLFYLENTIEKVEGMRPYSPLELAGRDIYIR 65

Query: 62  NGCVGCHSQMIRPFRAETERYGHYSVAGESVWDHPFLWGSKRTGPDLARVGGRYSDDWQR 121
            GC  CHSQMIRPFR E ERYGHYS+A ES++DHPF WGSKRTGPDLARVG RYS++W  
Sbjct: 66  EGCYVCHSQMIRPFRDEVERYGHYSLAAESMYDHPFQWGSKRTGPDLARVGDRYSNEWHV 125

Query: 122 AHLYNPRNVVPESKMPAYPFLVENKLDGKDTAKKMEVLRTLGVPYTDEDIAGAAAAVKGK 181
            H+  PR+VVPES MP+Y FL E  L+ K+ A  +E  R +GVPYTDE I  AAA +K +
Sbjct: 126 QHMIEPRSVVPESVMPSYAFLKETPLEVKNVAMSLEANRAVGVPYTDEMIGNAAADLKAQ 185

Query: 182 -----------------------------TEMDALVAYLQGLGTII 198
                                        TEMDALVAYLQ LGT++
Sbjct: 186 ADPNADGSGVEARYPKAKLGDFDGDPQRLTEMDALVAYLQMLGTLV 231