Pairwise Alignments

Query, 480 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

Subject, 593 a.a., alternative cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 20/221 (9%)

Query: 194 YAGATDAMIQ---WWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALIT 250
           Y G +  + Q   W++GH  V       F G++   +   A + I+ YR+ +   WA++ 
Sbjct: 265 YGGGSPILFQHLFWFFGHPEVYIVALPAF-GIVSDLISTHARKNIFGYRMMV---WAIVI 320

Query: 251 L-----YIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTL-SGAWHKLRT 304
           +      +WA  HH++ + +  +        ++I+  P+   + N ++TL  G  H   T
Sbjct: 321 IGGLSFIVWA--HHMYVSGMNPYFGFFFATTTLIIAVPTAIKVYNWVLTLWRGNIHL--T 376

Query: 305 DPILRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAIY 364
            P+L  L   + F       G  +    V+     T + + H H        M+  GAIY
Sbjct: 377 LPMLFALAFIVTFVN-GGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVIFGAIY 435

Query: 365 HMIPRLFGRVQMHSVALINTHFWLATIGTVLYIASMWVNGI 405
           H  P++ GR  M + A+   HFW+  IG       M   G+
Sbjct: 436 HWYPKITGR--MLNEAMGQIHFWVTFIGAYAIFFPMHYLGL 474