Pairwise Alignments

Query, 480 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

Subject, 551 a.a., cbb3-type cytochrome c oxidase subunit I from Sinorhizobium meliloti 1021

 Score =  546 bits (1408), Expect = e-160
 Identities = 249/457 (54%), Positives = 328/457 (71%), Gaps = 3/457 (0%)

Query: 22  TVVWGILGMGLGVFIASQLVWPELNFGLPWTTFGRLRPLHTNLVIFAFGGCALFATSYYV 81
           T+ W I GM +GV+ A+QL WP LNF   W +FGR+RP HT  VIF FGG AL ATS++V
Sbjct: 82  TLFWAIFGMFIGVWAAAQLAWPSLNFDTAWASFGRIRPAHTTGVIFGFGGNALIATSFHV 141

Query: 82  VQRTCQTRLISDSLAAFTFWGWQAVIVGAIVTLPLGYTTTKEYAELEWPIAILLAIVWVT 141
           VQRT + RL       F  +G+    + A+    +G T +KEYAE EW   + L IVWVT
Sbjct: 142 VQRTSRARLADQLSPWFVLFGYNLFCILAVTGYFMGVTQSKEYAEAEWYADLWLVIVWVT 201

Query: 142 YAVVFFGTIVKRKTKHIYVGNWFYGAFILVTAMLHIVNHASLPVSL--FKSYSAYAGATD 199
           Y +++  T+ +R+  HIYV NW+Y AFI+V A+LHI+N+ ++PVSL   KSY+ ++G  D
Sbjct: 202 YFILYIRTLARRREPHIYVANWYYMAFIVVVAILHIINNLTVPVSLGHAKSYTIWSGVQD 261

Query: 200 AMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALITLYIWAGPHH 259
           +M+QWWYGHNAV FFLT GFL M+YY++PK+AERPI+SYRLSI+ FW +   Y+WAG HH
Sbjct: 262 SMVQWWYGHNAVAFFLTAGFLAMLYYYLPKRAERPIFSYRLSILSFWGITFFYMWAGSHH 321

Query: 260 LHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTLSGAWHKLRTDPILRFLVVSLAFYG 319
           LHYTALP W Q+LGM  S++LL PSW    N ++TL+GAWHK+R D  LRF++++  FYG
Sbjct: 322 LHYTALPHWVQNLGMTFSVMLLVPSWASAGNALLTLNGAWHKVRDDATLRFIMMAAFFYG 381

Query: 320 MSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAIYHMIPRLFGRVQMHSV 379
           +STFEG  +A++ VNSLSHYTDWT+GHVHAGALGWVA+I+ G++Y ++P ++ R +M+S 
Sbjct: 382 LSTFEGSFLAVRPVNSLSHYTDWTVGHVHAGALGWVALITYGSLYTLVPAIWKRERMYSA 441

Query: 380 ALINTHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVEALQASHPGYIVRA 439
           AL+  HFWLA  GTV+Y+ +MW +GI QGLMWR    DGTL YSFV++L A +P YI RA
Sbjct: 442 ALVEVHFWLAFAGTVIYVFAMWNSGIIQGLMWRTYTGDGTLAYSFVDSLVAMYPYYIARA 501

Query: 440 LGGAFFAAGMLFMAYNVWRTVRASDPAEAEAAAKIAV 476
            GG  F  G +   YN+W TVR   PA AE    + V
Sbjct: 502 FGGLLFLIGAVVATYNIWMTVRGV-PALAERHGDVPV 537