Pairwise Alignments

Query, 480 a.a., cbb3-type cytochrome c oxidase subunit I from Pseudomonas simiae WCS417

Subject, 478 a.a., cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  778 bits (2009), Expect = 0.0
 Identities = 358/466 (76%), Positives = 407/466 (87%), Gaps = 3/466 (0%)

Query: 10  YNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPELNFGLPWTTFGRLRPLHTNLVIFAF 69
           YNY +VRQFA+ TV+WGI+GM +GV IA+QL+WP LNF  PW T+ RLRPLHTN VIFAF
Sbjct: 12  YNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRPLHTNAVIFAF 71

Query: 70  GGCALFATSYYVVQRTCQTRLISDSLAAFTFWGWQAVIVGAIVTLPLGYTTTKEYAELEW 129
           G  ALFATSYYVVQRTCQTRL +  LAAFTFWGWQA+I+ A +TLP+GYT+ KEYAELEW
Sbjct: 72  GTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYTSGKEYAELEW 131

Query: 130 PIAILLAIVWVTYAVVFFGTIVKRKTKHIYVGNWFYGAFILVTAMLHIVNHASLPVSLFK 189
           PI I + IVWV+YA+VFFGTI+KR T HIYV NWF+GAFI+  A+LHIVN  ++PVSLFK
Sbjct: 132 PIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIVNSMAVPVSLFK 191

Query: 190 SYSAYAGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWALI 249
           SYS Y+GA DAM+QWWYGHNAVGF LT GFLGMMYYFVPKQA RP+YSYRLSIVHFWALI
Sbjct: 192 SYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSYRLSIVHFWALI 251

Query: 250 TLYIWAGPHHLHYTALPDWAQSLGMAMSIILLAPSWGGMINGMMTLSGAWHKLRTDPILR 309
            LYIWAGPHHLHYTALPDW QSLGM MS+IL APSWGGMING+MTLSGAWHKLRTDP+LR
Sbjct: 252 ALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLR 311

Query: 310 FLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAIYHMIPR 369
           FLVVSL+FYGMSTFEGPMMAIKTVN+LSHYTDWT+GHVH+GALGWVAM+SIG++YH+IP 
Sbjct: 312 FLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVSIGSLYHLIPV 371

Query: 370 LFGRVQMHSVALINTHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVEALQ 429
           LFG  +M+S+ L+N HFWLATIGTVLYI SMW++G+ QGLMWRA+N DGTLTYSFVE+L+
Sbjct: 372 LFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADGTLTYSFVESLE 431

Query: 430 ASHPGYIVRALGGAFFAAGMLFMAYNVWRTVRASD---PAEAEAAA 472
           AS+P Y VR LGG FF  GML MAYNV RTV+AS    PA AEA A
Sbjct: 432 ASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEAKA 477