Pairwise Alignments

Query, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  265 bits (677), Expect = 3e-75
 Identities = 174/517 (33%), Positives = 265/517 (51%), Gaps = 42/517 (8%)

Query: 6   PVTQRERTFPAQQRLISTTDAKGVITYCNDAFVEISGFSRDELVRAPHNLVRHPDVPPAV 65
           P  Q+E       +L+STTD KGVITYCND F  I+GF  DEL+   HN+VRH  +P A 
Sbjct: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81

Query: 66  FAHMWSTLKQGLPWMGIVKNRCKTGDHYWVNAYVTPVFEGNQVVGYESVRIKPTAEQIRR 125
           FA MW  LKQG  W GIVKNR K+G  YWV+AYVTP+++  Q+ GY+SVR+K   + +  
Sbjct: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141

Query: 126 AEALYHRINQGKSAIPQRDKWLPVLQDWLPFILVSQLSF--MIGASLNSHWGFALAAGLS 183
           A   Y  +   + A  +           + F L + L +  ++GA ++     ALA G  
Sbjct: 142 ATKAYQALLAAEKAGKK-----------IQFKLHTSLRYALLLGALMSP----ALAHGFQ 186

Query: 184 -----------VPLGLLGLSWQQRGLKRLLRLAEQTTSDPLIAQMYTDSRGAQARLEMSI 232
                      +P G+LGL ++Q  ++   +L +       I+++      A +  +  +
Sbjct: 187 APEQWQWLASLLPAGVLGLLFRQELVRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHL 246

Query: 233 LSQEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATT 292
               AR++T L R+ D+A  L + A Q +         L  Q    + V  A + + +  
Sbjct: 247 KMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAA 306

Query: 293 QEVASHVQRTADATQEANRLTGRGRDIAGETREAI-------QRLSVAVGETGVTVTQLA 345
           + V+SH       T  A++L  + +D   ET+ +I       QRL+       +T  +L+
Sbjct: 307 ERVSSH-------THSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLS 359

Query: 346 KDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTG 405
             + ++G ++  I GIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  +T 
Sbjct: 360 DQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQ 419

Query: 406 QIHALIAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAA 465
           QI   I  +  T  A    + A   Q E+         Q L  +   ++ +  +  ++A+
Sbjct: 420 QIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVAS 479

Query: 466 ATEEQSSVAEEISRNISTIALLADQTSEQAMNSAQLS 502
           A + Q  +  E++++I +IA +A Q S       QL+
Sbjct: 480 AAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLA 516