Pairwise Alignments

Query, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  201 bits (512), Expect = 5e-56
 Identities = 125/286 (43%), Positives = 170/286 (59%), Gaps = 7/286 (2%)

Query: 234 SQEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQ 293
           SQ  +LKT  + + D AE   ++A  S  +       +E+Q  E EQ+ATA+N+MA T  
Sbjct: 346 SQIRQLKTIASGVLDGAEKTANEAEVSRLV-------VEQQLQELEQLATAMNEMAMTAS 398

Query: 294 EVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDEIGG 353
           EVA+  Q  ADA +E    +  G  +  ET +AIQRLS+ +G +   V +L K +D I  
Sbjct: 399 EVANSAQVAADAAKEGESASLEGSSVVHETTDAIQRLSIRIGSSVEDVKELVKATDRIET 458

Query: 354 VVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHALIAK 413
           V+DVI  IADQTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRT +ST QI  +I +
Sbjct: 459 VLDVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQSTMQISEIIEQ 518

Query: 414 LQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQSSV 473
           LQ+ A    ++MD    + +  V +  + ++ +  + +A+  I+DM  QIA+A EEQS V
Sbjct: 519 LQEGAKNVSRSMDESKLETDIVVEKTNQVNEKISLVQQAIHRISDMNLQIASAAEEQSLV 578

Query: 474 AEEISRNISTIALLADQTSEQAMNSAQLSEELTHTANTQYSLVERF 519
           AEEI+ N   I  L+ + SE A N+             Q  L+  F
Sbjct: 579 AEEINNNTVNIKDLSIKLSEAASNAGTEMNAQVSKVKEQNELLNEF 624