Pairwise Alignments

Query, 454 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

Subject, 904 a.a., ribosome-associated ATPase/putative transporter RbbA from Rhodopseudomonas palustris CGA009

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 11/210 (5%)

Query: 38  FREFWALRDISFVVRKGETVGIIGRNGSGKSTLLQIICGTLTPTAGDVQTSGRVAALLEL 97
           F +F A+  ++F +++GE  G +G NG GKST ++++ G LTPT G+ +  G V    ++
Sbjct: 279 FGDFTAVDHVNFQIKRGEIFGFLGSNGCGKSTTMKMLTGLLTPTEGEARLFGEVLDASDM 338

Query: 98  GS-----------GFNPDFSGRENVYMNAAVLGLSREETDARFSQIEAFAEIGNFIDQPV 146
            +               + + R+N+ ++A +  L   +   R +++    ++ +  D   
Sbjct: 339 ATRKRVGYMSQSFSLYSELTVRQNLLLHAQLFELPSAQIPDRVAEMLTRFDLADAADSRP 398

Query: 147 KSYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRKCFARIEAIKANGATILFVSH 206
            S   GM  RL  AVA+   P++LI+DE  S  D + +   +  + A+       +F+S 
Sbjct: 399 DSLPLGMRQRLQLAVAVIHRPEVLILDEPTSGVDPVARDSFWRMLIALSREDGVTIFIST 458

Query: 207 SGSAVVELCDRAILLDNGDKLTEGAPKNVI 236
                 E CDR  L+  G  L  GAP  ++
Sbjct: 459 HFMNEAERCDRISLMHAGKVLAVGAPHELV 488



 Score = 74.3 bits (181), Expect = 2e-17
 Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 16/206 (7%)

Query: 43  ALRDISFVVRKGETVGIIGRNGSGKSTLLQIICGTLTPTAGDV--------------QTS 88
           AL D++  +  G+ VG+IG +G GKSTLL +I G     +G+V              Q++
Sbjct: 20  ALDDVTLELPAGKMVGLIGPDGVGKSTLLALIAGVRRIQSGEVLALDGDMRDARHRAQSA 79

Query: 89  GRVAALLE-LGSGFNPDFSGRENVYMNAAVLGLSREETDARFSQIEAFAEIGNFIDQPVK 147
            R+A + + LG    P  S  EN+     + G    E +AR + +     +  F D+P  
Sbjct: 80  ARIAYMPQGLGRNLYPTLSVFENLDFFGRLFGQGAAERNARIADLLRATGLSPFGDRPAG 139

Query: 148 SYSSGMMVRLAFAVAINVDPQILIVDEALSVGDELFQRKCFARIEAI-KANGATILFVSH 206
             S GM  +L+   A+  DP +LI+DE  +  D L +R+ +  I+ I K      + V+ 
Sbjct: 140 KLSGGMKQKLSLCCALIHDPDLLILDEPTTGVDPLSRRQFWELIDRIRKRRPQMSVLVAT 199

Query: 207 SGSAVVELCDRAILLDNGDKLTEGAP 232
           +     E  D    L++G  +  G P
Sbjct: 200 AYMEEAERFDWLAALNDGKVIGAGTP 225