Pairwise Alignments

Query, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 60.8 bits (146), Expect = 4e-14
 Identities = 67/292 (22%), Positives = 127/292 (43%), Gaps = 28/292 (9%)

Query: 2   RPVDTLYLLGLAAIWGASFLFMRIIAPEIGTVPTAFFRVSIAAAGLLVILAMMRVSWDFQ 61
           R +  L +      WG SF+  +II   I  +   F RV IAA  +++I  +   +   +
Sbjct: 4   RSLGILLMFLTVIFWGISFVSTKIILEFIPPITIGFIRVVIAA--VILIFFIRNFTKYSK 61

Query: 62  GKFRTVLLLGVINSGIPATMYSVAAQALPAGYSAIFNATTPLMGVLIGGLFFSERLTPSK 121
             F  ++L G +         +VA +   A  +++  AT P+  +++  +   E+  PSK
Sbjct: 62  EDFVYIVLAGFLGITSYYLFENVALKYTTATNASLIAATVPIFYLIVSDIV--EKKIPSK 119

Query: 122 IA--GVCLGLFGVGVLTRAGPVAFDLELLTGALACLLATTCYGFAGFLARRWLDQRGGLD 179
           I   G  +GLFGV +L   G    +L  L   L  +    C         + L +    D
Sbjct: 120 IKYFGSLIGLFGVFILILNGKFVLELNPLGDIL--MFGAVCTWVLYTFVIQKLQKHD--D 175

Query: 180 SRLSALGSMLGATLFLLPF----------FAYSAISQPPASWGGWQVWGSLLGLGLVCTA 229
            +++   +++GA +F +PF          F ++ +  P  ++       SLL L + C+A
Sbjct: 176 LKVTRDITLIGA-VFFIPFTIMELGYNGMFEFTILLNPYIAF-------SLLYLAIFCSA 227

Query: 230 FAYILYFRLLTSIGPVKSMTVTFMIPPFGVLWGALLLGEPLSMAHVYGGVLI 281
            AY+ +   +   G   +    ++IP   ++  A++L    ++  + G VL+
Sbjct: 228 IAYLFWNMAIRLAGASTTTNGVYIIPIVAMITDAIILKNIPNIYAIIGAVLV 279