Pairwise Alignments

Query, 298 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

Subject, 296 a.a., DMT family transporter from Methanococcus maripaludis S2

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 56/250 (22%), Positives = 98/250 (39%), Gaps = 9/250 (3%)

Query: 33  VPTAFFRVSIAAAGLLVILAMMRVSWDF-QGKFRTVLLLGVINSGIPATMYSVAAQALPA 91
           V T  FR  IA   L V L   ++S    +  F  +L  G     +       A   +P 
Sbjct: 35  VTTLMFRFLIAGLILYVFLKFKKISLKISRHNFVEILFYGAFLYALNTVFLYEAYNYIPT 94

Query: 92  GYSAIFNATTPLMGVLIGGLFFSERLTPSKIAGVCLGLFGVGVLTRAGPVAFDLELLTGA 151
           G +   +   P+   L+    F E L  +K+  +     G+  L       FD+    G 
Sbjct: 95  GIATTLHFIYPVTVTLLMISIFKENLGINKVLALIFSFLGMYCLLGGNCAGFDIY---GV 151

Query: 152 LACLLATTCYGFAGFLARRWLDQRGGLDSRLSALGSMLGATLFLLPFFAYSAISQPPASW 211
           L  L A +   +AG++      +   +DS ++     + +++ L   F Y   +      
Sbjct: 152 L--LAAGSGLVYAGYIVSAGKCKYSKIDSYVTIFYLSILSSVLL---FIYGLFTNTLTLN 206

Query: 212 GGWQVWGSLLGLGLVCTAFAYILYFRLLTSIGPVKSMTVTFMIPPFGVLWGALLLGEPLS 271
             +  + S+  + + CT  A I +   +  IGP  +  ++ + P   ++ G LLL E LS
Sbjct: 207 MAFSSYASIGLISIFCTVLALIAFLEGIKLIGPSNTAILSTLEPIVSIILGILLLNEVLS 266

Query: 272 MAHVYGGVLI 281
                G VL+
Sbjct: 267 FKIGLGSVLV 276