Pairwise Alignments

Query, 388 a.a., 3-oxoacyl-ACP synthase from Pseudomonas simiae WCS417

Subject, 405 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase II, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  357 bits (915), Expect = e-103
 Identities = 200/393 (50%), Positives = 253/393 (64%), Gaps = 14/393 (3%)

Query: 5   LNALGVICALGRGQDEVSRNLFAGDCSGMRAESGWVPERVLPVAGVHGELATIPAELGQQ 64
           +  +G+   LG+  ++V   L AGD S M+     +  +   VA V   L TIPA L Q 
Sbjct: 7   ITQIGLCTPLGQTPEQVLARLIAGDTSAMQTSDSLLFGQSTLVAPVTESLPTIPAALTQF 66

Query: 65  SSRNNQLLLEAALQIESAIRQAIHTYGASRVGIVLGTSTSGIDEASRGIAHFLREQQFPG 124
             RNNQLLL AALQI   +  A  TYGA R+G+VLGTSTSGI +    +A+  +   FP 
Sbjct: 67  DCRNNQLLLAAALQITDTVELAKQTYGADRIGVVLGTSTSGIAKGELALAYRNQHGHFPA 126

Query: 125 DYDYQQQELSAPANFLADWLQLSGPAYVISTACTSSARALMSAHRLLDLGVCDAVICGGV 184
           DY Y QQEL + ++FL    +L GP+Y ISTAC+SSA+   SA RLL+  +CD VI GG+
Sbjct: 127 DYHYFQQELGSTSDFLRQLFELQGPSYTISTACSSSAKVFASAKRLLEAKLCDMVIVGGI 186

Query: 185 DSLCKLTLNGFSSLDAVSNERCNPFSVNRNGINIGEAAVLFLM------SKERAPIALLG 238
           DSLC+LT+NGF +L++VS   CNPFS NR+GINIGE A LF +      +   A + L G
Sbjct: 187 DSLCQLTVNGFHALESVSKGHCNPFSANRDGINIGEGAALFTLTLATDNTANEACVLLAG 246

Query: 239 SGASCDAHHISAPEPTGKGALQSMRKALASAQLQPEQIGYLNLHGTATQHNDAMESLAVA 298
            G S DAHH+SAP P G GA+ +M+ AL  AQ+  + I Y+NLHGTAT  NDAMES AV 
Sbjct: 247 IGESSDAHHMSAPHPEGAGAIAAMKAALRDAQISAQDIDYINLHGTATPKNDAMESRAVL 306

Query: 299 SLFPD-GVACSSTKPMSGHTLGAAGALEAAFCWLSLA-HNR---VPPHVWDGQADPALPA 353
           S+F D     SSTKP+ GHTLGAAGA+EAAFC+L L+ HN    +PPH +DGQ DP  P+
Sbjct: 307 SVFGDTPPPASSTKPLVGHTLGAAGAIEAAFCYLLLSQHNHSFALPPHRFDGQQDPQDPS 366

Query: 354 LQWA---QAAEPLGKRCLMSNSFAFGGNNVSLI 383
           +      Q AE      +MSNSFAFGG+N SLI
Sbjct: 367 IALVAPMQCAEHGKLNYVMSNSFAFGGSNASLI 399