Pairwise Alignments

Query, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  452 bits (1164), Expect = e-131
 Identities = 267/536 (49%), Positives = 359/536 (66%), Gaps = 1/536 (0%)

Query: 4   RNMRIGLRASLSFGVLASLLVIVGMFGLGQMAKLRQSALVIEASWMPSIENIHDSAAIVA 63
           R MRI LRA L F V+A L+ ++G+F L ++A +   A  ++   +P+I+ +        
Sbjct: 3   RQMRIALRAGLGFAVVALLVFLLGVFALTRIAAMEGDAEKVDQRLLPTIQLLGQVNQEFL 62

Query: 64  SIRLEALRLATTDESRIRDNSKALITRQHTELQTLLDHHKTLLSGDEEREMLTQLEGNAN 123
            IR   LRL  ++ +     ++ L   + T  Q   D  + L+   E + +L   + +  
Sbjct: 63  MIRASTLRLLISEPAERSRGAETLDGLRKTLAQERQDLDR-LIQDTEGKALLANFDQSLA 121

Query: 124 AYLSLVGQIVALVDKDQQQDAIDLLNSRLAPQGVILNKSLTDMITFNQSGVQTAVDSAAQ 183
            Y S   +IV L  +++ ++AI++    L       +K++ D+I  N++    A   A +
Sbjct: 122 RYESFQRRIVELALQNRMEEAIEITRGELNEHARSTSKAVYDLIGLNRNAANAASAHALE 181

Query: 184 TYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDLSQPIAVSGKD 243
             +SA   V   ++LA  AT++LA LLTRSI  PL +A+ VA  IA GDL++   V G D
Sbjct: 182 VAASAFQGVVVAMILAFIATIILAMLLTRSIVQPLAEAVGVAEVIAGGDLTRHFQVVGSD 241

Query: 244 EPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQAQNDEIEQAAT 303
           EPA+LL+AL  MQ  L+ T++GIS+S+ QL  AAEE++ V E STR L  QN EIEQAAT
Sbjct: 242 EPARLLSALQAMQRSLRETIQGISDSSNQLASAAEELNVVTEDSTRGLHQQNHEIEQAAT 301

Query: 304 AVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDEVLGASNKAEG 363
           AV EM+AAVDEVA NAV+++EAS+ SDE ++HG  Q+  T+ SI  L D+V   + + E 
Sbjct: 302 AVNEMTAAVDEVARNAVATSEASRESDETAQHGRQQVIRTVDSIGLLADDVTQTATEVER 361

Query: 364 LAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQDS 423
           LA Q +DISKVL+VIR IA QTNLLALNAAIEAARAG+AGRGFAVVADEVR+LA RTQ S
Sbjct: 362 LAGQVRDISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALAHRTQQS 421

Query: 424 TEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAISQISQRNLVI 483
           T+EIEQMI  + QGT   V A+  S E+A  TL+ A +AG AL+ I +AISQIS+RNLVI
Sbjct: 422 TQEIEQMIGDVHQGTDKAVHAMQLSNERARTTLELARAAGEALDGIASAISQISERNLVI 481

Query: 484 ASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLNGLVARF 539
           ASA+E+QA VAR+VDR+LVNIRDLS Q++AGA QTSAASQEL+RLA+DLN LVARF
Sbjct: 482 ASASEEQAQVAREVDRNLVNIRDLSLQSSAGANQTSAASQELARLAIDLNNLVARF 537