Pairwise Alignments

Query, 1303 a.a., ATP-dependent helicase HrpA from Pseudomonas simiae WCS417

Subject, 860 a.a., ATP-dependent helicase HrpB (NCBI) from Rhodospirillum rubrum S1H

 Score =  247 bits (630), Expect = 4e-69
 Identities = 163/452 (36%), Positives = 234/452 (51%), Gaps = 28/452 (6%)

Query: 72  LPIAAKRDEIKEALNKHQVLIIAGETGSGKTTQLPKICLEIGRGQFGLIGHT----QPRR 127
           LPI      + EAL  H   ++    G+GKTT++P   L    G   L G      +PRR
Sbjct: 25  LPIDPVLPALLEALASHGRAVLIAPPGAGKTTRVPPALL----GALWLGGQKVVMLEPRR 80

Query: 128 IAARSVASRVAEELATPLGALVGYQVRFEDQSDSNTLIKLMTDGILLAETQNDRYLERYD 187
           +A R+ A R+A E    +G   G++VR E +S   T +++MT+GIL    Q+D  L    
Sbjct: 81  LATRAAARRMAFEAGEAVGQRFGFRVRGESRSGPLTRVEVMTEGILTRRIQDDPELAGVG 140

Query: 188 TIIVDEAHERSLNIDFLLGYLKTLLPR-RPDLKVIITSATIDLERFSKHFDDAPIVEVSG 246
            +I+DE HER L  D     L+ +    RPDL++++ SAT+D    +   DDAP++E  G
Sbjct: 141 CVILDEFHERGLQGDLAFALLREIQGALRPDLRLLVMSATLDGAAIAALMDDAPVIESHG 200

Query: 247 RTFPVDTWYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAYERSERRSPGDVLVFLPG 306
           R FPV       T+   E     +    + + IL  L++           PG VL FLPG
Sbjct: 201 RAFPV-------TITHGERPAARDLGPAMARTILRALED----------EPGSVLAFLPG 243

Query: 307 EREIRDAAEVLRKAQLKHTEILPLYARLSPAEQQRIFQSHPG--RRVVLATNVAETSLTV 364
           EREI   A  L +A    T + PLY  L PAEQ       P   R+VVLAT++AETSLT+
Sbjct: 244 EREIAAVAGALARALPADTVLRPLYGALPPAEQDAAISPCPPGQRKVVLATDIAETSLTI 303

Query: 365 PGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASANQRKGRCGRVEPGICVRLYSEEDF 424
            G+R V+DSG  R  R+  +  + RL    ISQA A QR+GR GR+EPG+C+RL+ E + 
Sbjct: 304 EGVRIVVDSGLRRSPRFDPQTGLSRLDTVRISQAGAEQRRGRAGRLEPGVCLRLWPEAEH 363

Query: 425 IGRPEFTDPEILRTNLAAVILQMLHLRLGEITDFPFIEPPDGKAISDGFNLLQELSAVDR 484
              P    PEIL  +LA + L++      +     +  PP    ++   +LL  L A++ 
Sbjct: 364 RALPAQETPEILAADLAPLALELARWGARDAAALCWPTPPPPGPLAQARDLLTSLGALEP 423

Query: 485 NSQLTPLGRQLARLPVDPRMGRMLLEAAKLGS 516
              L+  G  +A LP+ PR+  M+L A   G+
Sbjct: 424 AGGLSAHGAAMAALPLHPRLAHMVLAAKADGA 455