Pairwise Alignments
Query, 805 a.a., DNA gyrase subunit B from Pseudomonas simiae WCS417
Subject, 626 a.a., DNA topoisomerase IV subunit B from Vibrio cholerae E7946 ATCC 55056
Score = 373 bits (957), Expect = e-107
Identities = 221/569 (38%), Positives = 329/569 (57%), Gaps = 19/569 (3%)
Query: 7 YDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSIDEALAGHCDDISIIIH 66
Y++ +I+VL GL+ VR+RPGMY T +H+ EV+DNS+DEALAG+ I +I+H
Sbjct: 5 YNAGAIEVLNGLEPVRRRPGMYTDTTRP----NHLGQEVIDNSVDEALAGYASKIQVILH 60
Query: 67 PDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVN 126
D+S+ V D+GRG+PVD+H EE VS E+I+ LHAGGKF + +Y+ SGGLHGVG+SVVN
Sbjct: 61 ADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKFSNKNYQFSGGLHGVGISVVN 120
Query: 127 ALSEELILTVRRSGKIWEQTYVHGVPKEPMKIVG--DSETTGTQIHFKPSAETFKNIHFS 184
ALS+ + + VRR G+++E + HG + + G TGT +HF P + F + +FS
Sbjct: 121 ALSKRVEVAVRRDGQVYEIAFEHGDKVTELTVTGTCGRRNTGTSVHFWPDTKYFDSPNFS 180
Query: 185 WDILAKRIRELSFLNSGVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQ---VF 241
L +R + L G+ I+ D+ + E + YE GL+ ++ T + +
Sbjct: 181 VSRLINNLRAKAVLCPGLEIIFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTG 240
Query: 242 HFNIQREDGIGVEIALQWNDSFNENLL-CFTNNIPQRDGGTHLVGFRSALTRNLNTYIEA 300
F Q E A+ W E + + N IP GGTH+ G R L + + E
Sbjct: 241 EFTAQTE---AATWAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEF 297
Query: 301 EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMGKYFSD 360
L + V TG+D + ++S+K+ DP+F+ QTK++L S + V + FS
Sbjct: 298 RNLLPR-GVKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVVKDAFSL 356
Query: 361 FLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSE 420
+L E P A+ + I A A R ++++ R+K A A LPGKL DC +D +E
Sbjct: 357 WLNEKPQLAEQLAEVCI--ANAHSRMRASKKVVRKKIASGPA-LPGKLTDCTVQDLNRTE 413
Query: 421 LYLVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIG 480
L+LVEGDSAGGSAKQ R+R QA++PL+GKILN + D++++SQEV + AL GI
Sbjct: 414 LFLVEGDSAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVAL--GID 471
Query: 481 RDEYNIDKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKK 540
D N++ LRY + I+ DAD DG HI TLL F R L++ G++Y+A PPLY++
Sbjct: 472 PDSDNLEALRYGKVCILADADSDGLHIATLLCALFTRHFRALVKAGHVYVAMPPLYRIDC 531
Query: 541 GKQEQYIKDDDAMEEYMTQSALEDASLHL 569
GK+ Y DD E + + + + A +++
Sbjct: 532 GKEVFYALDDQEKEGVLERLSQKKAKVNV 560
Score = 64.3 bits (155), Expect = 2e-14
Identities = 32/77 (41%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 721 KEALDWLMAESTKRHTIQRYKGLGEMNPDQLWETTMDPAQRRMLRVTIEDAIGADQIFNT 780
KE + +++ + +QR+KGLGEMNP QL ETTMDP RR++++TI+DA D++ +
Sbjct: 544 KEGVLERLSQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEMMDM 603
Query: 781 LMG-DAVEPRRDFIESN 796
L+G + RR +++ N
Sbjct: 604 LLGKKRADDRRAWLQRN 620